Gene : Glyma.18G078800 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR23153:SF37 - DNA DAMAGE RESPONSE PROTEIN WSS1 Genomic Order:  788
Name:  ? Glyma.18G078800 Secondary Identifier:  ? PAC:30555455
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G078800 0.5kb upstream 0.5kb upstream 3785 true Chr18: 7551755-7555539 Glycine max
Glyma.18G078800 0.5kb upstream 0.5kb upstream 500 false Chr18: 7551755-7552254 Glycine max
Glyma.18G078800 0.5kb downstream 0.5kb downstream 3785 true Chr18: 7552255-7556039 Glycine max
Glyma.18G078800 0.5kb downstream 0.5kb downstream 500 false Chr18: 7555540-7556039 Glycine max
Glyma.18G078800 1.0kb upstream 1.0kb upstream 4285 true Chr18: 7551255-7555539 Glycine max
Glyma.18G078800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 7551255-7552254 Glycine max
Glyma.18G078800 1.0kb downstream 1.0kb downstream 4285 true Chr18: 7552255-7556539 Glycine max
Glyma.18G078800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 7555540-7556539 Glycine max
Glyma.18G078800 2.0kb upstream 2.0kb upstream 5285 true Chr18: 7550255-7555539 Glycine max
Glyma.18G078800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 7550255-7552254 Glycine max
Glyma.18G078800 2.0kb downstream 2.0kb downstream 5285 true Chr18: 7552255-7557539 Glycine max
Glyma.18G078800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 7555540-7557539 Glycine max
Glyma.18G078800 5.0kb upstream 5.0kb upstream 8285 true Chr18: 7547255-7555539 Glycine max
Glyma.18G078800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 7547255-7552254 Glycine max
Glyma.18G078800 5.0kb downstream 5.0kb downstream 8285 true Chr18: 7552255-7560539 Glycine max
Glyma.18G078800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 7555540-7560539 Glycine max
Glyma.18G078800 10.0kb upstream 10.0kb upstream 13285 true Chr18: 7542255-7555539 Glycine max
Glyma.18G078800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 7542255-7552254 Glycine max
Glyma.18G078800 10.0kb downstream 10.0kb downstream 13285 true Chr18: 7552255-7565539 Glycine max
Glyma.18G078800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 7555540-7565539 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306124 5265 Fabidae View MSA
124067155 5270 Rosid View MSA
123740113 5271 Pentapetalae View MSA
122785802 5272 Eudicot View MSA
122043963 5273 Angiosperm View MSA
121347536 5274 Embryophyte View MSA
123425458 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.63707 0.0 8.25166    
cufflinks 2.07194 0.0 6.71232    
cufflinks 2.34937 0.0 7.4554    
cufflinks 1.66988 0.0 5.55947   Low
cufflinks 1.8128 0.0 5.97711    
cufflinks 2.8696 0.0 8.86694   High
cufflinks 2.8946 0.0 8.95034   High
cufflinks 1.59465 0.0 5.33748   Low
cufflinks 2.11372 0.0 6.82589    
cufflinks 0.863       Low
cufflinks 2.958       High
cufflinks 1.612        
cufflinks 1.453        
cufflinks 1.483        
cufflinks 2.345        
cufflinks 1.217        
cufflinks 1.725        
cufflinks 1.265        
cufflinks 2.005        
cufflinks 1.061       Low
cufflinks 2.477       High
cufflinks 1.16        
cufflinks 1.517        
cufflinks 3.062       High
cufflinks 1.005       Low
cufflinks 2.809       High

0 Strain