Gene : Glyma.18G078600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11040//PTHR11040:SF23 - ZINC/IRON TRANSPORTER Genomic Order:  786
Name:  ? Glyma.18G078600 Secondary Identifier:  ? PAC:30557226
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G078600 0.5kb upstream 0.5kb upstream 3858 true Chr18: 7536785-7540642 Glycine max
Glyma.18G078600 0.5kb upstream 0.5kb upstream 500 false Chr18: 7536785-7537284 Glycine max
Glyma.18G078600 0.5kb downstream 0.5kb downstream 3858 true Chr18: 7537285-7541142 Glycine max
Glyma.18G078600 0.5kb downstream 0.5kb downstream 500 false Chr18: 7540643-7541142 Glycine max
Glyma.18G078600 1.0kb upstream 1.0kb upstream 4358 true Chr18: 7536285-7540642 Glycine max
Glyma.18G078600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 7536285-7537284 Glycine max
Glyma.18G078600 1.0kb downstream 1.0kb downstream 4358 true Chr18: 7537285-7541642 Glycine max
Glyma.18G078600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 7540643-7541642 Glycine max
Glyma.18G078600 2.0kb upstream 2.0kb upstream 5358 true Chr18: 7535285-7540642 Glycine max
Glyma.18G078600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 7535285-7537284 Glycine max
Glyma.18G078600 2.0kb downstream 2.0kb downstream 5358 true Chr18: 7537285-7542642 Glycine max
Glyma.18G078600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 7540643-7542642 Glycine max
Glyma.18G078600 5.0kb upstream 5.0kb upstream 8358 true Chr18: 7532285-7540642 Glycine max
Glyma.18G078600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 7532285-7537284 Glycine max
Glyma.18G078600 5.0kb downstream 5.0kb downstream 8358 true Chr18: 7537285-7545642 Glycine max
Glyma.18G078600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 7540643-7545642 Glycine max
Glyma.18G078600 10.0kb upstream 10.0kb upstream 13358 true Chr18: 7527285-7540642 Glycine max
Glyma.18G078600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 7527285-7537284 Glycine max
Glyma.18G078600 10.0kb downstream 10.0kb downstream 13358 true Chr18: 7537285-7550642 Glycine max
Glyma.18G078600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 7540643-7550642 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303270 5265 Fabidae View MSA
124061308 5270 Rosid View MSA
123739218 5271 Pentapetalae View MSA
122792201 5272 Eudicot View MSA
122044792 5273 Angiosperm View MSA
121349012 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.269 0.0 30.2697   High
cufflinks 4.00065 0.0 11.7622    
cufflinks 16.616 0.0 44.3331   High
cufflinks 3.04141 0.0 9.29432    
cufflinks 3.21923 0.0 9.76919    
cufflinks 1.16794 0.0 4.03749   Low
cufflinks 2.25516 0.0 7.19667    
cufflinks 8.78541 0.0 23.8908    
cufflinks 2.7242 0.0 8.44445    
cufflinks 4.931        
cufflinks 4.334        
cufflinks 4.455        
cufflinks 1.191       Low
cufflinks 0.883       Low
cufflinks 4.322        
cufflinks 7.008        
cufflinks 5.818        
cufflinks 2.282        
cufflinks 4.984        
cufflinks 6.96     High  
cufflinks 1.78       Low
cufflinks 6.381        
cufflinks 8.049     High High
cufflinks 4.164        
cufflinks 6.15        
cufflinks 2.337        

0 Strain