Gene : Glyma.18G067000 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11977:SF25 - VILLIN-1 Genomic Order:  670
Name:  ? Glyma.18G067000 Secondary Identifier:  ? PAC:30558393
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G067000 0.5kb upstream 0.5kb upstream 17982 true Chr18: 6185051-6203032 Glycine max
Glyma.18G067000 0.5kb upstream 0.5kb upstream 500 false Chr18: 6185051-6185550 Glycine max
Glyma.18G067000 0.5kb downstream 0.5kb downstream 17982 true Chr18: 6185551-6203532 Glycine max
Glyma.18G067000 0.5kb downstream 0.5kb downstream 500 false Chr18: 6203033-6203532 Glycine max
Glyma.18G067000 1.0kb upstream 1.0kb upstream 18482 true Chr18: 6184551-6203032 Glycine max
Glyma.18G067000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 6184551-6185550 Glycine max
Glyma.18G067000 1.0kb downstream 1.0kb downstream 18482 true Chr18: 6185551-6204032 Glycine max
Glyma.18G067000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 6203033-6204032 Glycine max
Glyma.18G067000 2.0kb upstream 2.0kb upstream 19482 true Chr18: 6183551-6203032 Glycine max
Glyma.18G067000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 6183551-6185550 Glycine max
Glyma.18G067000 2.0kb downstream 2.0kb downstream 19482 true Chr18: 6185551-6205032 Glycine max
Glyma.18G067000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 6203033-6205032 Glycine max
Glyma.18G067000 5.0kb upstream 5.0kb upstream 22482 true Chr18: 6180551-6203032 Glycine max
Glyma.18G067000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 6180551-6185550 Glycine max
Glyma.18G067000 5.0kb downstream 5.0kb downstream 22482 true Chr18: 6185551-6208032 Glycine max
Glyma.18G067000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 6203033-6208032 Glycine max
Glyma.18G067000 10.0kb upstream 10.0kb upstream 27482 true Chr18: 6175551-6203032 Glycine max
Glyma.18G067000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 6175551-6185550 Glycine max
Glyma.18G067000 10.0kb downstream 10.0kb downstream 27482 true Chr18: 6185551-6213032 Glycine max
Glyma.18G067000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 6203033-6213032 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302737 5265 Fabidae View MSA
124062762 5270 Rosid View MSA
123741669 5271 Pentapetalae View MSA
122793328 5272 Eudicot View MSA
122050203 5273 Angiosperm View MSA
121349269 5274 Embryophyte View MSA
123428280 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.56141 0.0 6.29666   Low
cufflinks 13.1223 0.0 45.8938    
cufflinks 3.51155 0.0 11.5614   Low
cufflinks 10.892 0.0 41.4219    
cufflinks 8.24592 0.0 32.8246    
cufflinks 9.18479 0.0 27.4524    
cufflinks 7.98871 0.0 27.2405    
cufflinks 12.3969 0.0 47.6018    
cufflinks 8.62228 0.0 36.6889    
cufflinks 1.267       High
cufflinks 0.396        
cufflinks 0.764        
cufflinks 1.056        
cufflinks 0.941        
cufflinks 0.217       Low
cufflinks 0.653        
cufflinks 0.443        
cufflinks 1.576       High
cufflinks 1.718       High
cufflinks 0.429        
cufflinks 0.43        
cufflinks 0.487        
cufflinks 0.536        
cufflinks 0.359        
cufflinks 0.53        
cufflinks 0.534        

0 Strain