Gene : Glyma.18G072200 G. max Wm82.a2.v1
Defline:  (1 of 12) KOG1397 - Ca2+/H+ antiporter VCX1 and related proteins Genomic Order:  722
Name:  ? Glyma.18G072200 Secondary Identifier:  ? PAC:30555756
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G072200 0.5kb upstream 0.5kb upstream 6219 true Chr18: 6797403-6803621 Glycine max
Glyma.18G072200 0.5kb upstream 0.5kb upstream 500 false Chr18: 6803122-6803621 Glycine max
Glyma.18G072200 0.5kb downstream 0.5kb downstream 6219 true Chr18: 6796903-6803121 Glycine max
Glyma.18G072200 0.5kb downstream 0.5kb downstream 500 false Chr18: 6796903-6797402 Glycine max
Glyma.18G072200 1.0kb upstream 1.0kb upstream 6719 true Chr18: 6797403-6804121 Glycine max
Glyma.18G072200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 6803122-6804121 Glycine max
Glyma.18G072200 1.0kb downstream 1.0kb downstream 6719 true Chr18: 6796403-6803121 Glycine max
Glyma.18G072200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 6796403-6797402 Glycine max
Glyma.18G072200 2.0kb upstream 2.0kb upstream 7719 true Chr18: 6797403-6805121 Glycine max
Glyma.18G072200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 6803122-6805121 Glycine max
Glyma.18G072200 2.0kb downstream 2.0kb downstream 7719 true Chr18: 6795403-6803121 Glycine max
Glyma.18G072200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 6795403-6797402 Glycine max
Glyma.18G072200 5.0kb upstream 5.0kb upstream 10719 true Chr18: 6797403-6808121 Glycine max
Glyma.18G072200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 6803122-6808121 Glycine max
Glyma.18G072200 5.0kb downstream 5.0kb downstream 10719 true Chr18: 6792403-6803121 Glycine max
Glyma.18G072200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 6792403-6797402 Glycine max
Glyma.18G072200 10.0kb upstream 10.0kb upstream 15719 true Chr18: 6797403-6813121 Glycine max
Glyma.18G072200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 6803122-6813121 Glycine max
Glyma.18G072200 10.0kb downstream 10.0kb downstream 15719 true Chr18: 6787403-6803121 Glycine max
Glyma.18G072200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 6787403-6797402 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306798 5265 Fabidae View MSA
124071439 5270 Rosid View MSA
123747660 5271 Pentapetalae View MSA
122792881 5272 Eudicot View MSA
122045212 5273 Angiosperm View MSA
121347037 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.9664 0.0 9.81893   Low
cufflinks 4.55791 0.0 20.4107    
cufflinks 1.58477 0.0 6.15355   Low
cufflinks 3.57207 0.0 10.8722    
cufflinks 3.80075 0.0 11.5098    
cufflinks 8.79824 0.0 32.9796   High
cufflinks 4.84266 0.0 17.7503    
cufflinks 3.00768 0.0 9.73213    
cufflinks 3.87723 0.0 11.6816    
cufflinks 0.602       High
cufflinks 0.211       Low
cufflinks 0.289        
cufflinks 0.595        
cufflinks 0.453        
cufflinks 0.129       Low
cufflinks 0.398        
cufflinks 0.47        
cufflinks 0.512        
cufflinks 0.619       High
cufflinks 0.383        
cufflinks 0.301        
cufflinks 0.451        
cufflinks 0.731       High
cufflinks 0.286        
cufflinks 0.362        
cufflinks 0.307        

0 Strain