Gene : Glyma.18G073100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11538//PTHR11538:SF43 - PHENYLALANYL-TRNA SYNTHETASE Genomic Order:  731
Name:  ? Glyma.18G073100 Secondary Identifier:  ? PAC:30557552
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G073100 0.5kb upstream 0.5kb upstream 3855 true Chr18: 6895058-6898912 Glycine max
Glyma.18G073100 0.5kb upstream 0.5kb upstream 500 false Chr18: 6898413-6898912 Glycine max
Glyma.18G073100 0.5kb downstream 0.5kb downstream 3855 true Chr18: 6894558-6898412 Glycine max
Glyma.18G073100 0.5kb downstream 0.5kb downstream 500 false Chr18: 6894558-6895057 Glycine max
Glyma.18G073100 1.0kb upstream 1.0kb upstream 4355 true Chr18: 6895058-6899412 Glycine max
Glyma.18G073100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 6898413-6899412 Glycine max
Glyma.18G073100 1.0kb downstream 1.0kb downstream 4355 true Chr18: 6894058-6898412 Glycine max
Glyma.18G073100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 6894058-6895057 Glycine max
Glyma.18G073100 2.0kb upstream 2.0kb upstream 5355 true Chr18: 6895058-6900412 Glycine max
Glyma.18G073100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 6898413-6900412 Glycine max
Glyma.18G073100 2.0kb downstream 2.0kb downstream 5355 true Chr18: 6893058-6898412 Glycine max
Glyma.18G073100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 6893058-6895057 Glycine max
Glyma.18G073100 5.0kb upstream 5.0kb upstream 8355 true Chr18: 6895058-6903412 Glycine max
Glyma.18G073100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 6898413-6903412 Glycine max
Glyma.18G073100 5.0kb downstream 5.0kb downstream 8355 true Chr18: 6890058-6898412 Glycine max
Glyma.18G073100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 6890058-6895057 Glycine max
Glyma.18G073100 10.0kb upstream 10.0kb upstream 13355 true Chr18: 6895058-6908412 Glycine max
Glyma.18G073100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 6898413-6908412 Glycine max
Glyma.18G073100 10.0kb downstream 10.0kb downstream 13355 true Chr18: 6885058-6898412 Glycine max
Glyma.18G073100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 6885058-6895057 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029703 5273 Angiosperm View MSA
122298437 5265 Fabidae View MSA
124074900 5270 Rosid View MSA
123750465 5271 Pentapetalae View MSA
122797518 5272 Eudicot View MSA
121349631 5274 Embryophyte View MSA
123425246 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0523884 0.0 0.211266 Low  
cufflinks 1.25985 0.0 4.28746   High
cufflinks 0.975717 0.0 3.39523   High
cufflinks 0.398129 0.0 1.4742    
cufflinks 0.179457 0.0 0.690296 Low  
cufflinks 0.0193694 0.0 0.0830081 Low Low
cufflinks 0.522828 0.0 1.9107    
cufflinks 0.0603572 0.0 0.241704 Low  
cufflinks 0.123271 0.0 0.481189 Low  
cufflinks 0.013     Low Low
cufflinks 0.016     Low Low
cufflinks 1.346       High
cufflinks 0.152        
cufflinks 0.343        
cufflinks 0.034     Low  
cufflinks 0.19        
cufflinks 0.017     Low Low
cufflinks 1.561       High
cufflinks 1.229       High
cufflinks 0.145        
cufflinks 0.024     Low  
cufflinks 0.235        
cufflinks 0.244        
cufflinks 0.005     Low Low
cufflinks 0.22        
cufflinks 0.105        

0 Strain