Gene : Glyma.18G059300 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22950:SF280 - TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN Genomic Order:  593
Name:  ? Glyma.18G059300 Secondary Identifier:  ? PAC:30556521
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G059300 0.5kb upstream 0.5kb upstream 4098 true Chr18: 5266618-5270715 Glycine max
Glyma.18G059300 0.5kb upstream 0.5kb upstream 500 false Chr18: 5266618-5267117 Glycine max
Glyma.18G059300 0.5kb downstream 0.5kb downstream 4098 true Chr18: 5267118-5271215 Glycine max
Glyma.18G059300 0.5kb downstream 0.5kb downstream 500 false Chr18: 5270716-5271215 Glycine max
Glyma.18G059300 1.0kb upstream 1.0kb upstream 4598 true Chr18: 5266118-5270715 Glycine max
Glyma.18G059300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 5266118-5267117 Glycine max
Glyma.18G059300 1.0kb downstream 1.0kb downstream 4598 true Chr18: 5267118-5271715 Glycine max
Glyma.18G059300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 5270716-5271715 Glycine max
Glyma.18G059300 2.0kb upstream 2.0kb upstream 5598 true Chr18: 5265118-5270715 Glycine max
Glyma.18G059300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 5265118-5267117 Glycine max
Glyma.18G059300 2.0kb downstream 2.0kb downstream 5598 true Chr18: 5267118-5272715 Glycine max
Glyma.18G059300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 5270716-5272715 Glycine max
Glyma.18G059300 5.0kb upstream 5.0kb upstream 8598 true Chr18: 5262118-5270715 Glycine max
Glyma.18G059300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 5262118-5267117 Glycine max
Glyma.18G059300 5.0kb downstream 5.0kb downstream 8598 true Chr18: 5267118-5275715 Glycine max
Glyma.18G059300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 5270716-5275715 Glycine max
Glyma.18G059300 10.0kb upstream 10.0kb upstream 13598 true Chr18: 5257118-5270715 Glycine max
Glyma.18G059300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 5257118-5267117 Glycine max
Glyma.18G059300 10.0kb downstream 10.0kb downstream 13598 true Chr18: 5267118-5280715 Glycine max
Glyma.18G059300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 5270716-5280715 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030722 5273 Angiosperm View MSA
122316587 5265 Fabidae View MSA
124075194 5270 Rosid View MSA
123754195 5271 Pentapetalae View MSA
122775591 5272 Eudicot View MSA
121299863 5274 Embryophyte View MSA
123337692 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.51566 0.0 9.0363   Low
cufflinks 10.941 0.0 40.9364    
cufflinks 5.3001 0.0 20.5878    
cufflinks 2.16927 0.0 11.4187   Low
cufflinks 6.6819 0.0 28.7139    
cufflinks 4.40011 0.0 18.2717    
cufflinks 26.5323 0.0 95.1039 High High
cufflinks 9.24925 0.0 35.7998    
cufflinks 7.49936 0.0 30.5742    
cufflinks 1.975        
cufflinks 5.91     High High
cufflinks 1.135        
cufflinks 1.897        
cufflinks 2.413        
cufflinks 0.759        
cufflinks 0.641       Low
cufflinks 3.477        
cufflinks 1.702        
cufflinks 3.882        
cufflinks 0.347       Low
cufflinks 3.976        
cufflinks 0.409       Low
cufflinks 1.029        
cufflinks 9.32     High High
cufflinks 0.692        
cufflinks 3.212        

0 Strain