Gene : Glyma.18G062200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR14493:SF54 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 66 Genomic Order:  622
Name:  ? Glyma.18G062200 Secondary Identifier:  ? PAC:30555651
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G062200 0.5kb upstream 0.5kb upstream 3606 true Chr18: 5675033-5678638 Glycine max
Glyma.18G062200 0.5kb upstream 0.5kb upstream 500 false Chr18: 5678139-5678638 Glycine max
Glyma.18G062200 0.5kb downstream 0.5kb downstream 3606 true Chr18: 5674533-5678138 Glycine max
Glyma.18G062200 0.5kb downstream 0.5kb downstream 500 false Chr18: 5674533-5675032 Glycine max
Glyma.18G062200 1.0kb upstream 1.0kb upstream 4106 true Chr18: 5675033-5679138 Glycine max
Glyma.18G062200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 5678139-5679138 Glycine max
Glyma.18G062200 1.0kb downstream 1.0kb downstream 4106 true Chr18: 5674033-5678138 Glycine max
Glyma.18G062200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 5674033-5675032 Glycine max
Glyma.18G062200 2.0kb upstream 2.0kb upstream 5106 true Chr18: 5675033-5680138 Glycine max
Glyma.18G062200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 5678139-5680138 Glycine max
Glyma.18G062200 2.0kb downstream 2.0kb downstream 5106 true Chr18: 5673033-5678138 Glycine max
Glyma.18G062200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 5673033-5675032 Glycine max
Glyma.18G062200 5.0kb upstream 5.0kb upstream 8106 true Chr18: 5675033-5683138 Glycine max
Glyma.18G062200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 5678139-5683138 Glycine max
Glyma.18G062200 5.0kb downstream 5.0kb downstream 8106 true Chr18: 5670033-5678138 Glycine max
Glyma.18G062200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 5670033-5675032 Glycine max
Glyma.18G062200 10.0kb upstream 10.0kb upstream 13106 true Chr18: 5675033-5688138 Glycine max
Glyma.18G062200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 5678139-5688138 Glycine max
Glyma.18G062200 10.0kb downstream 10.0kb downstream 13106 true Chr18: 5665033-5678138 Glycine max
Glyma.18G062200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 5665033-5675032 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298888 5265 Fabidae View MSA
124039362 5270 Rosid View MSA
123753423 5271 Pentapetalae View MSA
122793628 5272 Eudicot View MSA
122049418 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.97553 0.0 6.17783    
cufflinks 2.35673 0.0 7.18709    
cufflinks 1.13406 0.0 3.81055   Low
cufflinks 1.83617 0.0 5.7963    
cufflinks 1.48026 0.0 4.82419    
cufflinks 1.88551 0.0 5.92464    
cufflinks 2.84297 0.0 8.44269   High
cufflinks 1.98714 0.0 6.19872    
cufflinks 1.58011 0.0 5.0951    
cufflinks 0.967        
cufflinks 0.593       Low
cufflinks 1.202        
cufflinks 1.215        
cufflinks 1.33        
cufflinks 0.739        
cufflinks 1.49        
cufflinks 0.693       Low
cufflinks 1.506        
cufflinks 2.598       High
cufflinks 1.762        
cufflinks 0.618       Low
cufflinks 1.77        
cufflinks 2.16       High
cufflinks 0.681       Low
cufflinks 1.359        
cufflinks 0.561       Low

0 Strain