Gene : Glyma.18G063000 G. max Wm82.a2.v1
Defline:  (1 of 6) KOG2401 - Predicted MutS-related protein involved in mismatch repair Genomic Order:  630
Name:  ? Glyma.18G063000 Secondary Identifier:  ? PAC:30556706
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G063000 0.5kb upstream 0.5kb upstream 6669 true Chr18: 5762616-5769284 Glycine max
Glyma.18G063000 0.5kb upstream 0.5kb upstream 500 false Chr18: 5768785-5769284 Glycine max
Glyma.18G063000 0.5kb downstream 0.5kb downstream 6669 true Chr18: 5762116-5768784 Glycine max
Glyma.18G063000 0.5kb downstream 0.5kb downstream 500 false Chr18: 5762116-5762615 Glycine max
Glyma.18G063000 1.0kb upstream 1.0kb upstream 7169 true Chr18: 5762616-5769784 Glycine max
Glyma.18G063000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 5768785-5769784 Glycine max
Glyma.18G063000 1.0kb downstream 1.0kb downstream 7169 true Chr18: 5761616-5768784 Glycine max
Glyma.18G063000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 5761616-5762615 Glycine max
Glyma.18G063000 2.0kb upstream 2.0kb upstream 8169 true Chr18: 5762616-5770784 Glycine max
Glyma.18G063000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 5768785-5770784 Glycine max
Glyma.18G063000 2.0kb downstream 2.0kb downstream 8169 true Chr18: 5760616-5768784 Glycine max
Glyma.18G063000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 5760616-5762615 Glycine max
Glyma.18G063000 5.0kb upstream 5.0kb upstream 11169 true Chr18: 5762616-5773784 Glycine max
Glyma.18G063000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 5768785-5773784 Glycine max
Glyma.18G063000 5.0kb downstream 5.0kb downstream 11169 true Chr18: 5757616-5768784 Glycine max
Glyma.18G063000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 5757616-5762615 Glycine max
Glyma.18G063000 10.0kb upstream 10.0kb upstream 16169 true Chr18: 5762616-5778784 Glycine max
Glyma.18G063000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 5768785-5778784 Glycine max
Glyma.18G063000 10.0kb downstream 10.0kb downstream 16169 true Chr18: 5752616-5768784 Glycine max
Glyma.18G063000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 5752616-5762615 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307637 5265 Fabidae View MSA
124073935 5270 Rosid View MSA
123747200 5271 Pentapetalae View MSA
122786859 5272 Eudicot View MSA
122050833 5273 Angiosperm View MSA
121348139 5274 Embryophyte View MSA
123428671 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.513 0.0 66.2126 High  
cufflinks 20.6933 0.0 55.4681 High  
cufflinks 33.0589 0.0 91.5319 High High
cufflinks 16.7519 0.0 44.721    
cufflinks 13.762 0.0 36.7376   Low
cufflinks 19.4726 0.0 52.1179    
cufflinks 17.7514 0.0 47.4082    
cufflinks 19.3656 0.0 51.8297    
cufflinks 18.2243 0.0 48.6959    
cufflinks 5.877       Low
cufflinks 10.578     High  
cufflinks 9.759     High  
cufflinks 5.872       Low
cufflinks 5.557       Low
cufflinks 9.134     High  
cufflinks 9.202     High  
cufflinks 5.585       Low
cufflinks 10.272     High  
cufflinks 10.493     High  
cufflinks 10.433     High  
cufflinks 9.183     High  
cufflinks 11.208     High High
cufflinks 8.172     High  
cufflinks 10.567     High  
cufflinks 9.919     High  
cufflinks 8.679     High  

0 Strain