Gene : Glyma.18G064900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11654//PTHR11654:SF166 - OLIGOPEPTIDE TRANSPORTER-RELATED Genomic Order:  649
Name:  ? Glyma.18G064900 Secondary Identifier:  ? PAC:30555231
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G064900 0.5kb upstream 0.5kb upstream 6694 true Chr18: 5898723-5905416 Glycine max
Glyma.18G064900 0.5kb upstream 0.5kb upstream 500 false Chr18: 5904917-5905416 Glycine max
Glyma.18G064900 0.5kb downstream 0.5kb downstream 6694 true Chr18: 5898223-5904916 Glycine max
Glyma.18G064900 0.5kb downstream 0.5kb downstream 500 false Chr18: 5898223-5898722 Glycine max
Glyma.18G064900 1.0kb upstream 1.0kb upstream 7194 true Chr18: 5898723-5905916 Glycine max
Glyma.18G064900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 5904917-5905916 Glycine max
Glyma.18G064900 1.0kb downstream 1.0kb downstream 7194 true Chr18: 5897723-5904916 Glycine max
Glyma.18G064900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 5897723-5898722 Glycine max
Glyma.18G064900 2.0kb upstream 2.0kb upstream 8194 true Chr18: 5898723-5906916 Glycine max
Glyma.18G064900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 5904917-5906916 Glycine max
Glyma.18G064900 2.0kb downstream 2.0kb downstream 8194 true Chr18: 5896723-5904916 Glycine max
Glyma.18G064900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 5896723-5898722 Glycine max
Glyma.18G064900 5.0kb upstream 5.0kb upstream 11194 true Chr18: 5898723-5909916 Glycine max
Glyma.18G064900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 5904917-5909916 Glycine max
Glyma.18G064900 5.0kb downstream 5.0kb downstream 11194 true Chr18: 5893723-5904916 Glycine max
Glyma.18G064900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 5893723-5898722 Glycine max
Glyma.18G064900 10.0kb upstream 10.0kb upstream 16194 true Chr18: 5898723-5914916 Glycine max
Glyma.18G064900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 5904917-5914916 Glycine max
Glyma.18G064900 10.0kb downstream 10.0kb downstream 16194 true Chr18: 5888723-5904916 Glycine max
Glyma.18G064900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 5888723-5898722 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308641 5265 Fabidae View MSA
124065888 5270 Rosid View MSA
123751146 5271 Pentapetalae View MSA
122796632 5272 Eudicot View MSA
122045333 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.0848 0.0 57.3179    
cufflinks 2.34747 0.0 7.08118    
cufflinks 48.0522 0.0 144.13 High High
cufflinks 2.42839 0.0 7.28444    
cufflinks 10.6329 0.0 28.3804    
cufflinks 61.093 0.0 189.605 High High
cufflinks 0.843286 0.0 2.91815   Low
cufflinks 6.67419 0.0 18.0588    
cufflinks 11.3749 0.0 30.3468    
cufflinks 3.266        
cufflinks 37.492     High High
cufflinks 10.475     High  
cufflinks 6.938        
cufflinks 5.115        
cufflinks 21.808     High  
cufflinks 4.091        
cufflinks 26.41     High  
cufflinks 2.627       Low
cufflinks 1.95       Low
cufflinks 3.805        
cufflinks 71.208     High High
cufflinks 5.029        
cufflinks 3.734        
cufflinks 42.937     High High
cufflinks 3.63        
cufflinks 31.863     High High

0 Strain