Gene : Glyma.18G065600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23076:SF70 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 7, CHLOROPLASTIC-RELATED Genomic Order:  656
Name:  ? Glyma.18G065600 Secondary Identifier:  ? PAC:30557265
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G065600 0.5kb upstream 0.5kb upstream 8658 true Chr18: 5985891-5994548 Glycine max
Glyma.18G065600 0.5kb upstream 0.5kb upstream 500 false Chr18: 5985891-5986390 Glycine max
Glyma.18G065600 0.5kb downstream 0.5kb downstream 8658 true Chr18: 5986391-5995048 Glycine max
Glyma.18G065600 0.5kb downstream 0.5kb downstream 500 false Chr18: 5994549-5995048 Glycine max
Glyma.18G065600 1.0kb upstream 1.0kb upstream 9158 true Chr18: 5985391-5994548 Glycine max
Glyma.18G065600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 5985391-5986390 Glycine max
Glyma.18G065600 1.0kb downstream 1.0kb downstream 9158 true Chr18: 5986391-5995548 Glycine max
Glyma.18G065600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 5994549-5995548 Glycine max
Glyma.18G065600 2.0kb upstream 2.0kb upstream 10158 true Chr18: 5984391-5994548 Glycine max
Glyma.18G065600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 5984391-5986390 Glycine max
Glyma.18G065600 2.0kb downstream 2.0kb downstream 10158 true Chr18: 5986391-5996548 Glycine max
Glyma.18G065600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 5994549-5996548 Glycine max
Glyma.18G065600 5.0kb upstream 5.0kb upstream 13158 true Chr18: 5981391-5994548 Glycine max
Glyma.18G065600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 5981391-5986390 Glycine max
Glyma.18G065600 5.0kb downstream 5.0kb downstream 13158 true Chr18: 5986391-5999548 Glycine max
Glyma.18G065600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 5994549-5999548 Glycine max
Glyma.18G065600 10.0kb upstream 10.0kb upstream 18158 true Chr18: 5976391-5994548 Glycine max
Glyma.18G065600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 5976391-5986390 Glycine max
Glyma.18G065600 10.0kb downstream 10.0kb downstream 18158 true Chr18: 5986391-6004548 Glycine max
Glyma.18G065600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 5994549-6004548 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122787549 5272 Eudicot View MSA
122297668 5265 Fabidae View MSA
124036109 5270 Rosid View MSA
123748057 5271 Pentapetalae View MSA
122042272 5273 Angiosperm View MSA
121349711 5274 Embryophyte View MSA
123424503 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.81416 0.0 18.315    
cufflinks 5.08655 0.0 13.8996   Low
cufflinks 7.94988 0.0 21.2663   High
cufflinks 5.90446 0.0 15.9799    
cufflinks 6.03275 0.0 16.2968    
cufflinks 7.59906 0.0 20.3463    
cufflinks 4.34073 0.0 11.9926   Low
cufflinks 7.57266 0.0 20.2838    
cufflinks 5.90557 0.0 15.9776    
cufflinks 1.801       Low
cufflinks 3.336       High
cufflinks 2.936        
cufflinks 2.674        
cufflinks 1.989       Low
cufflinks 2.98        
cufflinks 2.433        
cufflinks 2.038       Low
cufflinks 2.454        
cufflinks 3.029        
cufflinks 2.252        
cufflinks 2.97        
cufflinks 2.608        
cufflinks 2.105        
cufflinks 3.694       High
cufflinks 2.201        
cufflinks 3.272       High

0 Strain