Gene : Glyma.18G066900 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG2227 - Pre-initiation complex, subunit CDC6, AAA+ superfamily ATPase Genomic Order:  669
Name:  ? Glyma.18G066900 Secondary Identifier:  ? PAC:30554524
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G066900 0.5kb upstream 0.5kb upstream 5997 true Chr18: 6167590-6173586 Glycine max
Glyma.18G066900 0.5kb upstream 0.5kb upstream 500 false Chr18: 6173087-6173586 Glycine max
Glyma.18G066900 0.5kb downstream 0.5kb downstream 5997 true Chr18: 6167090-6173086 Glycine max
Glyma.18G066900 0.5kb downstream 0.5kb downstream 500 false Chr18: 6167090-6167589 Glycine max
Glyma.18G066900 1.0kb upstream 1.0kb upstream 6497 true Chr18: 6167590-6174086 Glycine max
Glyma.18G066900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 6173087-6174086 Glycine max
Glyma.18G066900 1.0kb downstream 1.0kb downstream 6497 true Chr18: 6166590-6173086 Glycine max
Glyma.18G066900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 6166590-6167589 Glycine max
Glyma.18G066900 2.0kb upstream 2.0kb upstream 7497 true Chr18: 6167590-6175086 Glycine max
Glyma.18G066900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 6173087-6175086 Glycine max
Glyma.18G066900 2.0kb downstream 2.0kb downstream 7497 true Chr18: 6165590-6173086 Glycine max
Glyma.18G066900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 6165590-6167589 Glycine max
Glyma.18G066900 5.0kb upstream 5.0kb upstream 10497 true Chr18: 6167590-6178086 Glycine max
Glyma.18G066900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 6173087-6178086 Glycine max
Glyma.18G066900 5.0kb downstream 5.0kb downstream 10497 true Chr18: 6162590-6173086 Glycine max
Glyma.18G066900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 6162590-6167589 Glycine max
Glyma.18G066900 10.0kb upstream 10.0kb upstream 15497 true Chr18: 6167590-6183086 Glycine max
Glyma.18G066900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 6173087-6183086 Glycine max
Glyma.18G066900 10.0kb downstream 10.0kb downstream 15497 true Chr18: 6157590-6173086 Glycine max
Glyma.18G066900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 6157590-6167589 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305447 5265 Fabidae View MSA
124062546 5270 Rosid View MSA
123739764 5271 Pentapetalae View MSA
122789561 5272 Eudicot View MSA
122043998 5273 Angiosperm View MSA
121345653 5274 Embryophyte View MSA
123426004 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.264449 0.0 1.30892   Low
cufflinks 3.10069 0.0 12.3869   High
cufflinks 0.282467 0.0 1.42788   Low
cufflinks 0.706779 0.0 3.14757    
cufflinks 2.94133 0.0 9.07714   High
cufflinks 1.84123 0.0 6.58003    
cufflinks 0.655057 0.0 2.97036    
cufflinks 1.51256 0.0 7.6307    
cufflinks 2.09396 0.0 7.34091    
cufflinks 0.279        
cufflinks 0.005     Low Low
cufflinks 0.242        
cufflinks 0.835       High
cufflinks 1.161       High
cufflinks 0.014     Low Low
cufflinks 0.244        
cufflinks 0.047     Low  
cufflinks 0.171        
cufflinks 0.817       High
cufflinks 0.157        
cufflinks 0.023     Low Low
cufflinks 0.244        
cufflinks 0.435        
cufflinks 0.023     Low Low
cufflinks 0.185        
cufflinks 0.05     Low  

0 Strain