Gene : Glyma.18G120300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11932//PTHR11932:SF86 - CULLIN Genomic Order:  1203
Name:  ? Glyma.18G120300 Secondary Identifier:  ? PAC:30556186
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G120300 0.5kb upstream 0.5kb upstream 4585 true Chr18: 15012190-15016774 Glycine max
Glyma.18G120300 0.5kb upstream 0.5kb upstream 500 false Chr18: 15016275-15016774 Glycine max
Glyma.18G120300 0.5kb downstream 0.5kb downstream 4585 true Chr18: 15011690-15016274 Glycine max
Glyma.18G120300 0.5kb downstream 0.5kb downstream 500 false Chr18: 15011690-15012189 Glycine max
Glyma.18G120300 1.0kb upstream 1.0kb upstream 5085 true Chr18: 15012190-15017274 Glycine max
Glyma.18G120300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 15016275-15017274 Glycine max
Glyma.18G120300 1.0kb downstream 1.0kb downstream 5085 true Chr18: 15011190-15016274 Glycine max
Glyma.18G120300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 15011190-15012189 Glycine max
Glyma.18G120300 2.0kb upstream 2.0kb upstream 6085 true Chr18: 15012190-15018274 Glycine max
Glyma.18G120300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 15016275-15018274 Glycine max
Glyma.18G120300 2.0kb downstream 2.0kb downstream 6085 true Chr18: 15010190-15016274 Glycine max
Glyma.18G120300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 15010190-15012189 Glycine max
Glyma.18G120300 5.0kb upstream 5.0kb upstream 9085 true Chr18: 15012190-15021274 Glycine max
Glyma.18G120300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 15016275-15021274 Glycine max
Glyma.18G120300 5.0kb downstream 5.0kb downstream 9085 true Chr18: 15007190-15016274 Glycine max
Glyma.18G120300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 15007190-15012189 Glycine max
Glyma.18G120300 10.0kb upstream 10.0kb upstream 14085 true Chr18: 15012190-15026274 Glycine max
Glyma.18G120300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 15016275-15026274 Glycine max
Glyma.18G120300 10.0kb downstream 10.0kb downstream 14085 true Chr18: 15002190-15016274 Glycine max
Glyma.18G120300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 15002190-15012189 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301106 5265 Fabidae View MSA
124060963 5270 Rosid View MSA
123747222 5271 Pentapetalae View MSA
122785909 5272 Eudicot View MSA
122047217 5273 Angiosperm View MSA
121346252 5274 Embryophyte View MSA
123427758 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.25922 0.0 19.5039    
cufflinks 5.93193 0.0 16.0885    
cufflinks 9.62794 0.0 25.6904   High
cufflinks 5.79708 0.0 15.7362    
cufflinks 6.24816 0.0 16.9168    
cufflinks 10.9339 0.0 29.1724   High
cufflinks 5.04144 0.0 13.8551   Low
cufflinks 8.35385 0.0 22.3442    
cufflinks 6.23344 0.0 16.8664    
cufflinks 7.718     High  
cufflinks 9.002     High High
cufflinks 6.692        
cufflinks 8.411     High  
cufflinks 7.644     High  
cufflinks 4.656       Low
cufflinks 6.822        
cufflinks 4.188       Low
cufflinks 6.882        
cufflinks 5.688        
cufflinks 6.923     High  
cufflinks 8.241     High  
cufflinks 7.039        
cufflinks 5.887        
cufflinks 9.309     High High
cufflinks 7.219     High  
cufflinks 8.509     High  

0 Strain