Gene : Glyma.18G120400 G. max Wm82.a2.v1
Defline:  (1 of 6) 1.14.19.4 - Delta(8)-fatty-acid desaturase / SLD Genomic Order:  1204
Name:  ? Glyma.18G120400 Secondary Identifier:  ? PAC:30556196
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7601 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G120400 0.5kb upstream 0.5kb upstream 4333 true Chr18: 15086033-15090365 Glycine max
Glyma.18G120400 0.5kb upstream 0.5kb upstream 500 false Chr18: 15089866-15090365 Glycine max
Glyma.18G120400 0.5kb downstream 0.5kb downstream 4333 true Chr18: 15085533-15089865 Glycine max
Glyma.18G120400 0.5kb downstream 0.5kb downstream 500 false Chr18: 15085533-15086032 Glycine max
Glyma.18G120400 1.0kb upstream 1.0kb upstream 4833 true Chr18: 15086033-15090865 Glycine max
Glyma.18G120400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 15089866-15090865 Glycine max
Glyma.18G120400 1.0kb downstream 1.0kb downstream 4833 true Chr18: 15085033-15089865 Glycine max
Glyma.18G120400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 15085033-15086032 Glycine max
Glyma.18G120400 2.0kb upstream 2.0kb upstream 5833 true Chr18: 15086033-15091865 Glycine max
Glyma.18G120400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 15089866-15091865 Glycine max
Glyma.18G120400 2.0kb downstream 2.0kb downstream 5833 true Chr18: 15084033-15089865 Glycine max
Glyma.18G120400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 15084033-15086032 Glycine max
Glyma.18G120400 5.0kb upstream 5.0kb upstream 8833 true Chr18: 15086033-15094865 Glycine max
Glyma.18G120400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 15089866-15094865 Glycine max
Glyma.18G120400 5.0kb downstream 5.0kb downstream 8833 true Chr18: 15081033-15089865 Glycine max
Glyma.18G120400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 15081033-15086032 Glycine max
Glyma.18G120400 10.0kb upstream 10.0kb upstream 13833 true Chr18: 15086033-15099865 Glycine max
Glyma.18G120400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 15089866-15099865 Glycine max
Glyma.18G120400 10.0kb downstream 10.0kb downstream 13833 true Chr18: 15076033-15089865 Glycine max
Glyma.18G120400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 15076033-15086032 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122047499 5273 Angiosperm View MSA
122310948 5265 Fabidae View MSA
124071375 5270 Rosid View MSA
123743417 5271 Pentapetalae View MSA
122792306 5272 Eudicot View MSA
121347259 5274 Embryophyte View MSA
123427370 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0241 0.0 32.7174    
cufflinks 10.623 0.0 29.1496    
cufflinks 68.2315 0.0 195.406 High High
cufflinks 8.39262 0.0 23.4748    
cufflinks 11.7308 0.0 31.918    
cufflinks 37.2364 0.0 100.782 High High
cufflinks 1.33383 0.0 4.67805   Low
cufflinks 16.3418 0.0 43.7764    
cufflinks 6.50423 0.0 18.688    
cufflinks 9.543     High High
cufflinks 4.312        
cufflinks 10.008     High High
cufflinks 9.188     High  
cufflinks 9.31     High  
cufflinks 1.998       Low
cufflinks 3.991        
cufflinks 10.133     High High
cufflinks 8.727     High  
cufflinks 5.478        
cufflinks 2.98       Low
cufflinks 3.431        
cufflinks 3.764        
cufflinks 4.84        
cufflinks 6.259     High  
cufflinks 3.269       Low
cufflinks 10.217     High High

0 Strain