Gene : Glyma.18G125200 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1252
Name:  ? Glyma.18G125200 Secondary Identifier:  ? PAC:30556639
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G125200 0.5kb upstream 0.5kb upstream 3221 true Chr18: 16381351-16384571 Glycine max
Glyma.18G125200 0.5kb upstream 0.5kb upstream 500 false Chr18: 16384072-16384571 Glycine max
Glyma.18G125200 0.5kb downstream 0.5kb downstream 3221 true Chr18: 16380851-16384071 Glycine max
Glyma.18G125200 0.5kb downstream 0.5kb downstream 500 false Chr18: 16380851-16381350 Glycine max
Glyma.18G125200 1.0kb upstream 1.0kb upstream 3721 true Chr18: 16381351-16385071 Glycine max
Glyma.18G125200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 16384072-16385071 Glycine max
Glyma.18G125200 1.0kb downstream 1.0kb downstream 3721 true Chr18: 16380351-16384071 Glycine max
Glyma.18G125200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 16380351-16381350 Glycine max
Glyma.18G125200 2.0kb upstream 2.0kb upstream 4721 true Chr18: 16381351-16386071 Glycine max
Glyma.18G125200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 16384072-16386071 Glycine max
Glyma.18G125200 2.0kb downstream 2.0kb downstream 4721 true Chr18: 16379351-16384071 Glycine max
Glyma.18G125200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 16379351-16381350 Glycine max
Glyma.18G125200 5.0kb upstream 5.0kb upstream 7721 true Chr18: 16381351-16389071 Glycine max
Glyma.18G125200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 16384072-16389071 Glycine max
Glyma.18G125200 5.0kb downstream 5.0kb downstream 7721 true Chr18: 16376351-16384071 Glycine max
Glyma.18G125200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 16376351-16381350 Glycine max
Glyma.18G125200 10.0kb upstream 10.0kb upstream 12721 true Chr18: 16381351-16394071 Glycine max
Glyma.18G125200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 16384072-16394071 Glycine max
Glyma.18G125200 10.0kb downstream 10.0kb downstream 12721 true Chr18: 16371351-16384071 Glycine max
Glyma.18G125200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 16371351-16381350 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305611 5265 Fabidae View MSA
124070741 5270 Rosid View MSA
123749624 5271 Pentapetalae View MSA
122795805 5272 Eudicot View MSA
122048142 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121350345 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0552966 0.0 0.225268 Low  
cufflinks 0.549474 0.0 2.03293   High
cufflinks 0.0248876 0.0 0.106485 Low Low
cufflinks 0.0586812 0.0 0.238094 Low  
cufflinks 0.176765 0.0 0.688395 Low  
cufflinks 0.077828 0.0 0.312436 Low  
cufflinks 0.932881 0.0 3.34624   High
cufflinks 0.0398934 0.0 0.165208 Low  
cufflinks 0.0415091 0.0 0.171824 Low  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.056     Low  
cufflinks 0.055     Low  
cufflinks 0.067     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.195        
cufflinks 0.005     Low Low
cufflinks 0.117        
cufflinks 0.222        
cufflinks 0.194        
cufflinks 0.035     Low  
cufflinks 0.213        
cufflinks 0.168        
cufflinks 0.013     Low Low
cufflinks 0.337       High
cufflinks 0.0     Not Expressed Not Expressed

0 Strain