Gene : Glyma.18G129100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24092:SF85 - PHOSPHOLIPID-TRANSPORTING ATPASE 3 Genomic Order:  1291
Name:  ? Glyma.18G129100 Secondary Identifier:  ? PAC:30555465
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G129100 0.5kb upstream 0.5kb upstream 17961 true Chr18: 17426245-17444205 Glycine max
Glyma.18G129100 0.5kb upstream 0.5kb upstream 500 false Chr18: 17426245-17426744 Glycine max
Glyma.18G129100 0.5kb downstream 0.5kb downstream 17961 true Chr18: 17426745-17444705 Glycine max
Glyma.18G129100 0.5kb downstream 0.5kb downstream 500 false Chr18: 17444206-17444705 Glycine max
Glyma.18G129100 1.0kb upstream 1.0kb upstream 18461 true Chr18: 17425745-17444205 Glycine max
Glyma.18G129100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 17425745-17426744 Glycine max
Glyma.18G129100 1.0kb downstream 1.0kb downstream 18461 true Chr18: 17426745-17445205 Glycine max
Glyma.18G129100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 17444206-17445205 Glycine max
Glyma.18G129100 2.0kb upstream 2.0kb upstream 19461 true Chr18: 17424745-17444205 Glycine max
Glyma.18G129100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 17424745-17426744 Glycine max
Glyma.18G129100 2.0kb downstream 2.0kb downstream 19461 true Chr18: 17426745-17446205 Glycine max
Glyma.18G129100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 17444206-17446205 Glycine max
Glyma.18G129100 5.0kb upstream 5.0kb upstream 22461 true Chr18: 17421745-17444205 Glycine max
Glyma.18G129100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 17421745-17426744 Glycine max
Glyma.18G129100 5.0kb downstream 5.0kb downstream 22461 true Chr18: 17426745-17449205 Glycine max
Glyma.18G129100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 17444206-17449205 Glycine max
Glyma.18G129100 10.0kb upstream 10.0kb upstream 27461 true Chr18: 17416745-17444205 Glycine max
Glyma.18G129100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 17416745-17426744 Glycine max
Glyma.18G129100 10.0kb downstream 10.0kb downstream 27461 true Chr18: 17426745-17454205 Glycine max
Glyma.18G129100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 17444206-17454205 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026720 5273 Angiosperm View MSA
122242665 5265 Fabidae Singleton cluster - no MSA
124070114 5270 Rosid View MSA
123748640 5271 Pentapetalae View MSA
122772733 5272 Eudicot View MSA
121348747 5274 Embryophyte View MSA
123381002 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.24751 0.0 3.78473    
cufflinks 0.86756 0.0 2.76878    
cufflinks 1.3771 0.0 4.08899   High
cufflinks 1.1083 0.0 3.40886    
cufflinks 0.716032 0.0 2.35404    
cufflinks 0.54406 0.0 1.84595   Low
cufflinks 1.13718 0.0 3.50742    
cufflinks 0.906869 0.0 2.87371    
cufflinks 0.961168 0.0 3.02325    
cufflinks 0.154       Low
cufflinks 0.402       High
cufflinks 0.289        
cufflinks 0.185       Low
cufflinks 0.179       Low
cufflinks 0.34        
cufflinks 0.311        
cufflinks 0.208        
cufflinks 0.284        
cufflinks 0.234        
cufflinks 0.389       High
cufflinks 0.339        
cufflinks 0.402       High
cufflinks 0.239        
cufflinks 0.414       High
cufflinks 0.364        
cufflinks 0.274        

0 Strain