Gene : Glyma.18G109900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11941:SF94 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 5 Genomic Order:  1099
Name:  ? Glyma.18G109900 Secondary Identifier:  ? PAC:30555431
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7574 Glycine max pathologic  
Gmax VALDEG-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G109900 0.5kb upstream 0.5kb upstream 7880 true Chr18: 12768212-12776091 Glycine max
Glyma.18G109900 0.5kb upstream 0.5kb upstream 500 false Chr18: 12775592-12776091 Glycine max
Glyma.18G109900 0.5kb downstream 0.5kb downstream 7880 true Chr18: 12767712-12775591 Glycine max
Glyma.18G109900 0.5kb downstream 0.5kb downstream 500 false Chr18: 12767712-12768211 Glycine max
Glyma.18G109900 1.0kb upstream 1.0kb upstream 8380 true Chr18: 12768212-12776591 Glycine max
Glyma.18G109900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 12775592-12776591 Glycine max
Glyma.18G109900 1.0kb downstream 1.0kb downstream 8380 true Chr18: 12767212-12775591 Glycine max
Glyma.18G109900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 12767212-12768211 Glycine max
Glyma.18G109900 2.0kb upstream 2.0kb upstream 9380 true Chr18: 12768212-12777591 Glycine max
Glyma.18G109900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 12775592-12777591 Glycine max
Glyma.18G109900 2.0kb downstream 2.0kb downstream 9380 true Chr18: 12766212-12775591 Glycine max
Glyma.18G109900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 12766212-12768211 Glycine max
Glyma.18G109900 5.0kb upstream 5.0kb upstream 12380 true Chr18: 12768212-12780591 Glycine max
Glyma.18G109900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 12775592-12780591 Glycine max
Glyma.18G109900 5.0kb downstream 5.0kb downstream 12380 true Chr18: 12763212-12775591 Glycine max
Glyma.18G109900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 12763212-12768211 Glycine max
Glyma.18G109900 10.0kb upstream 10.0kb upstream 17380 true Chr18: 12768212-12785591 Glycine max
Glyma.18G109900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 12775592-12785591 Glycine max
Glyma.18G109900 10.0kb downstream 10.0kb downstream 17380 true Chr18: 12758212-12775591 Glycine max
Glyma.18G109900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 12758212-12768211 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306191 5265 Fabidae View MSA
124061384 5270 Rosid View MSA
123736609 5271 Pentapetalae View MSA
122789369 5272 Eudicot View MSA
122044821 5273 Angiosperm View MSA
121345696 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.2399 0.0 71.5066   Low
cufflinks 17.4896 0.0 67.195   Low
cufflinks 22.9132 0.0 89.928 High  
cufflinks 41.0571 0.0 155.739 High  
cufflinks 26.1898 0.0 101.839 High  
cufflinks 72.2535 0.0 322.461 High High
cufflinks 29.5045 0.0 131.522 High  
cufflinks 30.9844 0.0 129.117 High  
cufflinks 21.2925 0.0 81.5472 High  
cufflinks 2.116        
cufflinks 0.706        
cufflinks 1.146        
cufflinks 3.345       High
cufflinks 2.835       High
cufflinks 0.185       Low
cufflinks 1.071        
cufflinks 1.787        
cufflinks 1.501        
cufflinks 1.551        
cufflinks 0.962        
cufflinks 1.012        
cufflinks 1.063        
cufflinks 1.234        
cufflinks 1.45        
cufflinks 1.059        
cufflinks 1.568        

0 Strain