Gene : Glyma.18G111800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31642:SF6 - HXXXD-TYPE ACYL-TRANSFERASE-RELATED Genomic Order:  1118
Name:  ? Glyma.18G111800 Secondary Identifier:  ? PAC:30556547
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-4203 Glycine max pathologic  
Gmax PWY-5835 Glycine max pathologic  
Gmax PWY-6801 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G111800 0.5kb upstream 0.5kb upstream 6818 true Chr18: 13278153-13284970 Glycine max
Glyma.18G111800 0.5kb upstream 0.5kb upstream 500 false Chr18: 13278153-13278652 Glycine max
Glyma.18G111800 0.5kb downstream 0.5kb downstream 6818 true Chr18: 13278653-13285470 Glycine max
Glyma.18G111800 0.5kb downstream 0.5kb downstream 500 false Chr18: 13284971-13285470 Glycine max
Glyma.18G111800 1.0kb upstream 1.0kb upstream 7318 true Chr18: 13277653-13284970 Glycine max
Glyma.18G111800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 13277653-13278652 Glycine max
Glyma.18G111800 1.0kb downstream 1.0kb downstream 7318 true Chr18: 13278653-13285970 Glycine max
Glyma.18G111800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 13284971-13285970 Glycine max
Glyma.18G111800 2.0kb upstream 2.0kb upstream 8318 true Chr18: 13276653-13284970 Glycine max
Glyma.18G111800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 13276653-13278652 Glycine max
Glyma.18G111800 2.0kb downstream 2.0kb downstream 8318 true Chr18: 13278653-13286970 Glycine max
Glyma.18G111800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 13284971-13286970 Glycine max
Glyma.18G111800 5.0kb upstream 5.0kb upstream 11318 true Chr18: 13273653-13284970 Glycine max
Glyma.18G111800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 13273653-13278652 Glycine max
Glyma.18G111800 5.0kb downstream 5.0kb downstream 11318 true Chr18: 13278653-13289970 Glycine max
Glyma.18G111800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 13284971-13289970 Glycine max
Glyma.18G111800 10.0kb upstream 10.0kb upstream 16318 true Chr18: 13268653-13284970 Glycine max
Glyma.18G111800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 13268653-13278652 Glycine max
Glyma.18G111800 10.0kb downstream 10.0kb downstream 16318 true Chr18: 13278653-13294970 Glycine max
Glyma.18G111800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 13284971-13294970 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314012 5265 Fabidae View MSA
124064469 5270 Rosid View MSA
123743346 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0124275 0.0 0.0562038 Low Low
cufflinks 0.397761 0.0 1.48953    
cufflinks 1.48623 0.0 5.0922    
cufflinks 0.150507 0.0 0.587535 Low  
cufflinks 3.0211 0.0 9.35591   High
cufflinks 0.683928 0.0 2.48258    
cufflinks 0.0639474 0.0 0.257355 Low  
cufflinks 0.0865186 0.0 0.344483 Low  
cufflinks 3.76647 0.0 11.3322   High
cufflinks 0.002     Low Low
cufflinks 0.048     Low  
cufflinks 0.083     Low  
cufflinks 0.177        
cufflinks 0.015     Low  
cufflinks 0.03     Low  
cufflinks 0.051     Low  
cufflinks 0.842       High
cufflinks 0.011     Low Low
cufflinks 0.07     Low  
cufflinks 0.047     Low  
cufflinks 0.127        
cufflinks 0.035     Low  
cufflinks 0.028     Low  
cufflinks 0.032     Low  
cufflinks 0.063     Low  
cufflinks 0.226       High

0 Strain