Gene : Glyma.18G111900 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.5.1.18//2.5.1.32 - Glutathione transferase / S-(hydroxyalkyl)glutathione lyase // 15-cis-phytoene synthase / PSase Genomic Order:  1119
Name:  ? Glyma.18G111900 Secondary Identifier:  ? PAC:30557108
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CAROTENOID-PWY Glycine max pathologic  
Gmax PWY-6475 Glycine max pathologic  
Gmax PWY-6842 Glycine max pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G111900 0.5kb upstream 0.5kb upstream 3997 true Chr18: 13308032-13312028 Glycine max
Glyma.18G111900 0.5kb upstream 0.5kb upstream 500 false Chr18: 13308032-13308531 Glycine max
Glyma.18G111900 0.5kb downstream 0.5kb downstream 3997 true Chr18: 13308532-13312528 Glycine max
Glyma.18G111900 0.5kb downstream 0.5kb downstream 500 false Chr18: 13312029-13312528 Glycine max
Glyma.18G111900 1.0kb upstream 1.0kb upstream 4497 true Chr18: 13307532-13312028 Glycine max
Glyma.18G111900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 13307532-13308531 Glycine max
Glyma.18G111900 1.0kb downstream 1.0kb downstream 4497 true Chr18: 13308532-13313028 Glycine max
Glyma.18G111900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 13312029-13313028 Glycine max
Glyma.18G111900 2.0kb upstream 2.0kb upstream 5497 true Chr18: 13306532-13312028 Glycine max
Glyma.18G111900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 13306532-13308531 Glycine max
Glyma.18G111900 2.0kb downstream 2.0kb downstream 5497 true Chr18: 13308532-13314028 Glycine max
Glyma.18G111900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 13312029-13314028 Glycine max
Glyma.18G111900 5.0kb upstream 5.0kb upstream 8497 true Chr18: 13303532-13312028 Glycine max
Glyma.18G111900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 13303532-13308531 Glycine max
Glyma.18G111900 5.0kb downstream 5.0kb downstream 8497 true Chr18: 13308532-13317028 Glycine max
Glyma.18G111900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 13312029-13317028 Glycine max
Glyma.18G111900 10.0kb upstream 10.0kb upstream 13497 true Chr18: 13298532-13312028 Glycine max
Glyma.18G111900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 13298532-13308531 Glycine max
Glyma.18G111900 10.0kb downstream 10.0kb downstream 13497 true Chr18: 13308532-13322028 Glycine max
Glyma.18G111900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 13312029-13322028 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122312069 5265 Fabidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.8137 0.0 118.856 High High
cufflinks 7.61938 0.0 34.1483    
cufflinks 8.23777 0.0 36.7182    
cufflinks 2.27189 0.0 14.419    
cufflinks 2.77829 0.0 15.4804    
cufflinks 1.3445 0.0 5.28687    
cufflinks 1.48492 0.0 10.4264    
cufflinks 2.19314 0.0 11.7685    
cufflinks 0.532584 0.0 4.65555   Low
cufflinks 1.901        
cufflinks 0.012     Low Low
cufflinks 1.628        
cufflinks 0.682        
cufflinks 0.795        
cufflinks 0.084        
cufflinks 8.0     High High
cufflinks 0.078        
cufflinks 1.315        
cufflinks 2.403        
cufflinks 8.085     High High
cufflinks 0.048     Low Low
cufflinks 8.946     High High
cufflinks 7.584     High High
cufflinks 0.015     Low Low
cufflinks 9.608     High High
cufflinks 0.113        

0 Strain