Gene : Glyma.18G115300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10994:SF62 - RETICULON-LIKE PROTEIN B8 Genomic Order:  1153
Name:  ? Glyma.18G115300 Secondary Identifier:  ? PAC:30558581
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G115300 0.5kb upstream 0.5kb upstream 5480 true Chr18: 14037741-14043220 Glycine max
Glyma.18G115300 0.5kb upstream 0.5kb upstream 500 false Chr18: 14037741-14038240 Glycine max
Glyma.18G115300 0.5kb downstream 0.5kb downstream 5480 true Chr18: 14038241-14043720 Glycine max
Glyma.18G115300 0.5kb downstream 0.5kb downstream 500 false Chr18: 14043221-14043720 Glycine max
Glyma.18G115300 1.0kb upstream 1.0kb upstream 5980 true Chr18: 14037241-14043220 Glycine max
Glyma.18G115300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 14037241-14038240 Glycine max
Glyma.18G115300 1.0kb downstream 1.0kb downstream 5980 true Chr18: 14038241-14044220 Glycine max
Glyma.18G115300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 14043221-14044220 Glycine max
Glyma.18G115300 2.0kb upstream 2.0kb upstream 6980 true Chr18: 14036241-14043220 Glycine max
Glyma.18G115300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 14036241-14038240 Glycine max
Glyma.18G115300 2.0kb downstream 2.0kb downstream 6980 true Chr18: 14038241-14045220 Glycine max
Glyma.18G115300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 14043221-14045220 Glycine max
Glyma.18G115300 5.0kb upstream 5.0kb upstream 9980 true Chr18: 14033241-14043220 Glycine max
Glyma.18G115300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 14033241-14038240 Glycine max
Glyma.18G115300 5.0kb downstream 5.0kb downstream 9980 true Chr18: 14038241-14048220 Glycine max
Glyma.18G115300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 14043221-14048220 Glycine max
Glyma.18G115300 10.0kb upstream 10.0kb upstream 14980 true Chr18: 14028241-14043220 Glycine max
Glyma.18G115300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 14028241-14038240 Glycine max
Glyma.18G115300 10.0kb downstream 10.0kb downstream 14980 true Chr18: 14038241-14053220 Glycine max
Glyma.18G115300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 14043221-14053220 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310765 5265 Fabidae View MSA
124061075 5270 Rosid View MSA
123740052 5271 Pentapetalae View MSA
122787995 5272 Eudicot View MSA
122045587 5273 Angiosperm View MSA
121310470 5274 Embryophyte View MSA
123347943 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2635 0.0 41.5609    
cufflinks 5.33824 0.0 24.2179    
cufflinks 5.65849 0.0 25.0224    
cufflinks 5.38002 0.0 24.6334    
cufflinks 9.90344 0.0 37.8104    
cufflinks 41.3042 0.0 143.675 High High
cufflinks 3.10886 0.0 17.0717   Low
cufflinks 7.38076 0.0 30.1857    
cufflinks 17.8862 0.0 68.801    
cufflinks 0.618        
cufflinks 0.62        
cufflinks 0.701        
cufflinks 1.573        
cufflinks 0.193       Low
cufflinks 0.905        
cufflinks 1.261        
cufflinks 2.151       High
cufflinks 0.863        
cufflinks 0.741        
cufflinks 1.588        
cufflinks 1.063        
cufflinks 1.472        
cufflinks 1.665        
cufflinks 1.301        
cufflinks 1.595        
cufflinks 1.991       High

0 Strain