Gene : Glyma.18G104400 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.3.3.1 - Citrate (Si)-synthase / Citrate oxaloacetate-lyase ((pro-3S)-CH(2)COO->acetyl-CoA) Genomic Order:  1044
Name:  ? Glyma.18G104400 Secondary Identifier:  ? PAC:30556457
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Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLYOXYLATE-BYPASS Glycine max pathologic  
Gmax PWY-5464 Glycine max pathologic  
Gmax PWY-561 Glycine max pathologic  
Gmax PWY-5690 Glycine max pathologic  
Gmax PWY-6549 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G104400 0.5kb upstream 0.5kb upstream 24243 true Chr18: 11482927-11507169 Glycine max
Glyma.18G104400 0.5kb upstream 0.5kb upstream 500 false Chr18: 11506670-11507169 Glycine max
Glyma.18G104400 0.5kb downstream 0.5kb downstream 24243 true Chr18: 11482427-11506669 Glycine max
Glyma.18G104400 0.5kb downstream 0.5kb downstream 500 false Chr18: 11482427-11482926 Glycine max
Glyma.18G104400 1.0kb upstream 1.0kb upstream 24743 true Chr18: 11482927-11507669 Glycine max
Glyma.18G104400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 11506670-11507669 Glycine max
Glyma.18G104400 1.0kb downstream 1.0kb downstream 24743 true Chr18: 11481927-11506669 Glycine max
Glyma.18G104400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 11481927-11482926 Glycine max
Glyma.18G104400 2.0kb upstream 2.0kb upstream 25743 true Chr18: 11482927-11508669 Glycine max
Glyma.18G104400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 11506670-11508669 Glycine max
Glyma.18G104400 2.0kb downstream 2.0kb downstream 25743 true Chr18: 11480927-11506669 Glycine max
Glyma.18G104400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 11480927-11482926 Glycine max
Glyma.18G104400 5.0kb upstream 5.0kb upstream 28743 true Chr18: 11482927-11511669 Glycine max
Glyma.18G104400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 11506670-11511669 Glycine max
Glyma.18G104400 5.0kb downstream 5.0kb downstream 28743 true Chr18: 11477927-11506669 Glycine max
Glyma.18G104400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 11477927-11482926 Glycine max
Glyma.18G104400 10.0kb upstream 10.0kb upstream 33743 true Chr18: 11482927-11516669 Glycine max
Glyma.18G104400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 11506670-11516669 Glycine max
Glyma.18G104400 10.0kb downstream 10.0kb downstream 33743 true Chr18: 11472927-11506669 Glycine max
Glyma.18G104400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 11472927-11482926 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309645 5265 Fabidae View MSA
124065792 5270 Rosid View MSA
123748183 5271 Pentapetalae View MSA
122794190 5272 Eudicot View MSA
122044026 5273 Angiosperm View MSA
121344650 5274 Embryophyte View MSA
123424100 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.91092 0.0 21.6121    
cufflinks 6.94262 0.0 19.1449    
cufflinks 11.9941 0.0 32.1021   High
cufflinks 9.86857 0.0 26.6077    
cufflinks 7.87281 0.0 21.5085    
cufflinks 16.0263 0.0 42.7577   High
cufflinks 6.23438 0.0 17.3785   Low
cufflinks 7.67359 0.0 20.976    
cufflinks 6.64049 0.0 18.3631    
cufflinks 0.861        
cufflinks 0.397        
cufflinks 0.762        
cufflinks 0.734        
cufflinks 0.477        
cufflinks 0.468        
cufflinks 0.371        
cufflinks 0.933       High
cufflinks 0.824        
cufflinks 0.977       High
cufflinks 0.274       Low
cufflinks 0.491        
cufflinks 0.35       Low
cufflinks 1.007       High
cufflinks 0.632        
cufflinks 0.268       Low
cufflinks 0.884        

0 Strain