Gene : Glyma.18G105800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Genomic Order:  1058
Name:  ? Glyma.18G105800 Secondary Identifier:  ? PAC:30555114
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G105800 0.5kb upstream 0.5kb upstream 9860 true Chr18: 11772874-11782733 Glycine max
Glyma.18G105800 0.5kb upstream 0.5kb upstream 500 false Chr18: 11772874-11773373 Glycine max
Glyma.18G105800 0.5kb downstream 0.5kb downstream 9860 true Chr18: 11773374-11783233 Glycine max
Glyma.18G105800 0.5kb downstream 0.5kb downstream 500 false Chr18: 11782734-11783233 Glycine max
Glyma.18G105800 1.0kb upstream 1.0kb upstream 10360 true Chr18: 11772374-11782733 Glycine max
Glyma.18G105800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 11772374-11773373 Glycine max
Glyma.18G105800 1.0kb downstream 1.0kb downstream 10360 true Chr18: 11773374-11783733 Glycine max
Glyma.18G105800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 11782734-11783733 Glycine max
Glyma.18G105800 2.0kb upstream 2.0kb upstream 11360 true Chr18: 11771374-11782733 Glycine max
Glyma.18G105800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 11771374-11773373 Glycine max
Glyma.18G105800 2.0kb downstream 2.0kb downstream 11360 true Chr18: 11773374-11784733 Glycine max
Glyma.18G105800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 11782734-11784733 Glycine max
Glyma.18G105800 5.0kb upstream 5.0kb upstream 14360 true Chr18: 11768374-11782733 Glycine max
Glyma.18G105800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 11768374-11773373 Glycine max
Glyma.18G105800 5.0kb downstream 5.0kb downstream 14360 true Chr18: 11773374-11787733 Glycine max
Glyma.18G105800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 11782734-11787733 Glycine max
Glyma.18G105800 10.0kb upstream 10.0kb upstream 19360 true Chr18: 11763374-11782733 Glycine max
Glyma.18G105800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 11763374-11773373 Glycine max
Glyma.18G105800 10.0kb downstream 10.0kb downstream 19360 true Chr18: 11773374-11792733 Glycine max
Glyma.18G105800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 11782734-11792733 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307292 5265 Fabidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.09614 0.0 23.2704    
cufflinks 47.0816 0.0 172.751 High  
cufflinks 0.00571771 0.0 0.0617657 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 37.6941 0.0 129.384 High  
cufflinks 8.26937E-4 0.0 0.0479546 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.347        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.306        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain