Gene : Glyma.18G106400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33210:SF6 - PROTODERMAL FACTOR 1 Genomic Order:  1064
Name:  ? Glyma.18G106400 Secondary Identifier:  ? PAC:30557136
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G106400 0.5kb upstream 0.5kb upstream 2765 true Chr18: 11915287-11918051 Glycine max
Glyma.18G106400 0.5kb upstream 0.5kb upstream 500 false Chr18: 11917552-11918051 Glycine max
Glyma.18G106400 0.5kb downstream 0.5kb downstream 2765 true Chr18: 11914787-11917551 Glycine max
Glyma.18G106400 0.5kb downstream 0.5kb downstream 500 false Chr18: 11914787-11915286 Glycine max
Glyma.18G106400 1.0kb upstream 1.0kb upstream 3265 true Chr18: 11915287-11918551 Glycine max
Glyma.18G106400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 11917552-11918551 Glycine max
Glyma.18G106400 1.0kb downstream 1.0kb downstream 3265 true Chr18: 11914287-11917551 Glycine max
Glyma.18G106400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 11914287-11915286 Glycine max
Glyma.18G106400 2.0kb upstream 2.0kb upstream 4265 true Chr18: 11915287-11919551 Glycine max
Glyma.18G106400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 11917552-11919551 Glycine max
Glyma.18G106400 2.0kb downstream 2.0kb downstream 4265 true Chr18: 11913287-11917551 Glycine max
Glyma.18G106400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 11913287-11915286 Glycine max
Glyma.18G106400 5.0kb upstream 5.0kb upstream 7265 true Chr18: 11915287-11922551 Glycine max
Glyma.18G106400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 11917552-11922551 Glycine max
Glyma.18G106400 5.0kb downstream 5.0kb downstream 7265 true Chr18: 11910287-11917551 Glycine max
Glyma.18G106400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 11910287-11915286 Glycine max
Glyma.18G106400 10.0kb upstream 10.0kb upstream 12265 true Chr18: 11915287-11927551 Glycine max
Glyma.18G106400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 11917552-11927551 Glycine max
Glyma.18G106400 10.0kb downstream 10.0kb downstream 12265 true Chr18: 11905287-11917551 Glycine max
Glyma.18G106400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 11905287-11915286 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302047 5265 Fabidae View MSA
124068625 5270 Rosid View MSA
123747098 5271 Pentapetalae View MSA
122793338 5272 Eudicot View MSA
122042133 5273 Angiosperm View MSA
121349082 5274 Embryophyte View MSA
123381156 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0206848 0.0 0.107291 Low Low
cufflinks 571.069 0.0 5020.37 High High
cufflinks 70.9094 0.0 239.962 High  
cufflinks 8.77816 0.0 32.6114    
cufflinks 4.75777 0.0 19.9564    
cufflinks 115.265 0.0 425.247 High  
cufflinks 22.1045 0.0 71.1443 High  
cufflinks 15.5832 0.0 51.1893    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 10.996     High  
cufflinks 0.004     Low Low
cufflinks 25.72     High  
cufflinks 0.017     Low Low
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 41.479     High  
cufflinks 0.027     Low  
cufflinks 12.121     High  
cufflinks 155.883     High High
cufflinks 23.66     High  
cufflinks 0.008     Low Low
cufflinks 29.157     High  
cufflinks 57.183     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 29.119     High  
cufflinks 0.009     Low Low

0 Strain