Gene : Glyma.18G107000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10210:SF34 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 4 Genomic Order:  1070
Name:  ? Glyma.18G107000 Secondary Identifier:  ? PAC:30555344
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-662 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G107000 0.5kb upstream 0.5kb upstream 4120 true Chr18: 12028945-12033064 Glycine max
Glyma.18G107000 0.5kb upstream 0.5kb upstream 500 false Chr18: 12032565-12033064 Glycine max
Glyma.18G107000 0.5kb downstream 0.5kb downstream 4120 true Chr18: 12028445-12032564 Glycine max
Glyma.18G107000 0.5kb downstream 0.5kb downstream 500 false Chr18: 12028445-12028944 Glycine max
Glyma.18G107000 1.0kb upstream 1.0kb upstream 4620 true Chr18: 12028945-12033564 Glycine max
Glyma.18G107000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 12032565-12033564 Glycine max
Glyma.18G107000 1.0kb downstream 1.0kb downstream 4620 true Chr18: 12027945-12032564 Glycine max
Glyma.18G107000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 12027945-12028944 Glycine max
Glyma.18G107000 2.0kb upstream 2.0kb upstream 5620 true Chr18: 12028945-12034564 Glycine max
Glyma.18G107000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 12032565-12034564 Glycine max
Glyma.18G107000 2.0kb downstream 2.0kb downstream 5620 true Chr18: 12026945-12032564 Glycine max
Glyma.18G107000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 12026945-12028944 Glycine max
Glyma.18G107000 5.0kb upstream 5.0kb upstream 8620 true Chr18: 12028945-12037564 Glycine max
Glyma.18G107000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 12032565-12037564 Glycine max
Glyma.18G107000 5.0kb downstream 5.0kb downstream 8620 true Chr18: 12023945-12032564 Glycine max
Glyma.18G107000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 12023945-12028944 Glycine max
Glyma.18G107000 10.0kb upstream 10.0kb upstream 13620 true Chr18: 12028945-12042564 Glycine max
Glyma.18G107000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 12032565-12042564 Glycine max
Glyma.18G107000 10.0kb downstream 10.0kb downstream 13620 true Chr18: 12018945-12032564 Glycine max
Glyma.18G107000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 12018945-12028944 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299251 5265 Fabidae View MSA
124063296 5270 Rosid View MSA
123738822 5271 Pentapetalae View MSA
122786228 5272 Eudicot View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.50195 0.0 1.87374   Low
cufflinks 9.69914 0.0 26.733   High
cufflinks 1.60628 0.0 5.53348    
cufflinks 1.77104 0.0 6.04869    
cufflinks 4.9023 0.0 14.6343    
cufflinks 3.0053 0.0 9.59239    
cufflinks 1.40614 0.0 4.92186    
cufflinks 1.76119 0.0 6.00927    
cufflinks 2.93687 0.0 9.39691    
cufflinks 0.378        
cufflinks 0.753        
cufflinks 0.936        
cufflinks 3.184       High
cufflinks 4.929       High
cufflinks 0.293       Low
cufflinks 0.543        
cufflinks 1.334        
cufflinks 0.967        
cufflinks 3.793       High
cufflinks 0.214       Low
cufflinks 0.887        
cufflinks 0.323       Low
cufflinks 0.437        
cufflinks 0.827        
cufflinks 0.429        
cufflinks 1.12        

0 Strain