Gene : Glyma.18G107200 G. max Wm82.a2.v1
Defline:  (1 of 7) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  1072
Name:  ? Glyma.18G107200 Secondary Identifier:  ? PAC:30555076
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G107200 0.5kb upstream 0.5kb upstream 1439 true Chr18: 12059922-12061360 Glycine max
Glyma.18G107200 0.5kb upstream 0.5kb upstream 500 false Chr18: 12060861-12061360 Glycine max
Glyma.18G107200 0.5kb downstream 0.5kb downstream 1439 true Chr18: 12059422-12060860 Glycine max
Glyma.18G107200 0.5kb downstream 0.5kb downstream 500 false Chr18: 12059422-12059921 Glycine max
Glyma.18G107200 1.0kb upstream 1.0kb upstream 1939 true Chr18: 12059922-12061860 Glycine max
Glyma.18G107200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 12060861-12061860 Glycine max
Glyma.18G107200 1.0kb downstream 1.0kb downstream 1939 true Chr18: 12058922-12060860 Glycine max
Glyma.18G107200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 12058922-12059921 Glycine max
Glyma.18G107200 2.0kb upstream 2.0kb upstream 2939 true Chr18: 12059922-12062860 Glycine max
Glyma.18G107200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 12060861-12062860 Glycine max
Glyma.18G107200 2.0kb downstream 2.0kb downstream 2939 true Chr18: 12057922-12060860 Glycine max
Glyma.18G107200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 12057922-12059921 Glycine max
Glyma.18G107200 5.0kb upstream 5.0kb upstream 5939 true Chr18: 12059922-12065860 Glycine max
Glyma.18G107200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 12060861-12065860 Glycine max
Glyma.18G107200 5.0kb downstream 5.0kb downstream 5939 true Chr18: 12054922-12060860 Glycine max
Glyma.18G107200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 12054922-12059921 Glycine max
Glyma.18G107200 10.0kb upstream 10.0kb upstream 10939 true Chr18: 12059922-12070860 Glycine max
Glyma.18G107200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 12060861-12070860 Glycine max
Glyma.18G107200 10.0kb downstream 10.0kb downstream 10939 true Chr18: 12049922-12060860 Glycine max
Glyma.18G107200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 12049922-12059921 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300137 5265 Fabidae View MSA
124065171 5270 Rosid View MSA
123741196 5271 Pentapetalae View MSA
122795014 5272 Eudicot View MSA
122048300 5273 Angiosperm View MSA
121310921 5274 Embryophyte View MSA
123348293 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.02687 0.0 3.7934    
cufflinks 0.273655 0.0 1.07287    
cufflinks 0.350802 0.0 1.36371    
cufflinks 0.0975062 0.0 0.398198 Low Low
cufflinks 9.00623 0.0 26.4068   High
cufflinks 4.42952 0.0 14.4224    
cufflinks 0.0851126 0.0 0.349137 Low Low
cufflinks 1.95674 0.0 6.94644    
cufflinks 4.49429 0.0 14.5797    
cufflinks 10.4     High High
cufflinks 0.857       Low
cufflinks 1.234        
cufflinks 7.794     High High
cufflinks 12.946     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.705        
cufflinks 0.707       Low
cufflinks 9.885     High High
cufflinks 0.466       Low
cufflinks 5.526        
cufflinks 1.51        
cufflinks 3.624        
cufflinks 1.561        
cufflinks 0.73       Low
cufflinks 4.277        
cufflinks 2.145        

0 Strain