Gene : Glyma.18G107900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12741:SF16 - CALLOSE SYNTHASE 7-RELATED Genomic Order:  1079
Name:  ? Glyma.18G107900 Secondary Identifier:  ? PAC:30558097
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6773 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G107900 0.5kb upstream 0.5kb upstream 40796 true Chr18: 12219682-12260477 Glycine max
Glyma.18G107900 0.5kb upstream 0.5kb upstream 500 false Chr18: 12219682-12220181 Glycine max
Glyma.18G107900 0.5kb downstream 0.5kb downstream 40796 true Chr18: 12220182-12260977 Glycine max
Glyma.18G107900 0.5kb downstream 0.5kb downstream 500 false Chr18: 12260478-12260977 Glycine max
Glyma.18G107900 1.0kb upstream 1.0kb upstream 41296 true Chr18: 12219182-12260477 Glycine max
Glyma.18G107900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 12219182-12220181 Glycine max
Glyma.18G107900 1.0kb downstream 1.0kb downstream 41296 true Chr18: 12220182-12261477 Glycine max
Glyma.18G107900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 12260478-12261477 Glycine max
Glyma.18G107900 2.0kb upstream 2.0kb upstream 42296 true Chr18: 12218182-12260477 Glycine max
Glyma.18G107900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 12218182-12220181 Glycine max
Glyma.18G107900 2.0kb downstream 2.0kb downstream 42296 true Chr18: 12220182-12262477 Glycine max
Glyma.18G107900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 12260478-12262477 Glycine max
Glyma.18G107900 5.0kb upstream 5.0kb upstream 45296 true Chr18: 12215182-12260477 Glycine max
Glyma.18G107900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 12215182-12220181 Glycine max
Glyma.18G107900 5.0kb downstream 5.0kb downstream 45296 true Chr18: 12220182-12265477 Glycine max
Glyma.18G107900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 12260478-12265477 Glycine max
Glyma.18G107900 10.0kb upstream 10.0kb upstream 50296 true Chr18: 12210182-12260477 Glycine max
Glyma.18G107900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 12210182-12220181 Glycine max
Glyma.18G107900 10.0kb downstream 10.0kb downstream 50296 true Chr18: 12220182-12270477 Glycine max
Glyma.18G107900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 12260478-12270477 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305452 5265 Fabidae View MSA
124067889 5270 Rosid View MSA
123736773 5271 Pentapetalae View MSA
122788622 5272 Eudicot View MSA
122042706 5273 Angiosperm View MSA
121310004 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.33075 0.0 4.72136    
cufflinks 1.42821 0.0 5.0969    
cufflinks 1.99055 0.0 7.34236    
cufflinks 0.718175 0.0 3.08702    
cufflinks 1.96931 0.0 6.64659    
cufflinks 0.308084 0.0 2.14147   Low
cufflinks 2.23287 0.0 7.11826    
cufflinks 0.877765 0.0 2.72226    
cufflinks 2.4392 0.0 7.59338    
cufflinks 0.228        
cufflinks 0.114       Low
cufflinks 0.279        
cufflinks 0.235        
cufflinks 0.218        
cufflinks 0.153        
cufflinks 0.205        
cufflinks 0.123       Low
cufflinks 0.449       High
cufflinks 0.161        
cufflinks 0.287       High
cufflinks 0.125       Low
cufflinks 0.271        
cufflinks 0.181        
cufflinks 0.134        
cufflinks 0.237        
cufflinks 0.114       Low

0 Strain