Gene : Glyma.18G108100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12526:SF360 - SUCROSE-PHOSPHATE SYNTHASE 3-RELATED Genomic Order:  1081
Name:  ? Glyma.18G108100 Secondary Identifier:  ? PAC:30557165
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7238 Glycine max pathologic  
Gmax SUCSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G108100 0.5kb upstream 0.5kb upstream 7005 true Chr18: 12308018-12315022 Glycine max
Glyma.18G108100 0.5kb upstream 0.5kb upstream 500 false Chr18: 12314523-12315022 Glycine max
Glyma.18G108100 0.5kb downstream 0.5kb downstream 7005 true Chr18: 12307518-12314522 Glycine max
Glyma.18G108100 0.5kb downstream 0.5kb downstream 500 false Chr18: 12307518-12308017 Glycine max
Glyma.18G108100 1.0kb upstream 1.0kb upstream 7505 true Chr18: 12308018-12315522 Glycine max
Glyma.18G108100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 12314523-12315522 Glycine max
Glyma.18G108100 1.0kb downstream 1.0kb downstream 7505 true Chr18: 12307018-12314522 Glycine max
Glyma.18G108100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 12307018-12308017 Glycine max
Glyma.18G108100 2.0kb upstream 2.0kb upstream 8505 true Chr18: 12308018-12316522 Glycine max
Glyma.18G108100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 12314523-12316522 Glycine max
Glyma.18G108100 2.0kb downstream 2.0kb downstream 8505 true Chr18: 12306018-12314522 Glycine max
Glyma.18G108100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 12306018-12308017 Glycine max
Glyma.18G108100 5.0kb upstream 5.0kb upstream 11505 true Chr18: 12308018-12319522 Glycine max
Glyma.18G108100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 12314523-12319522 Glycine max
Glyma.18G108100 5.0kb downstream 5.0kb downstream 11505 true Chr18: 12303018-12314522 Glycine max
Glyma.18G108100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 12303018-12308017 Glycine max
Glyma.18G108100 10.0kb upstream 10.0kb upstream 16505 true Chr18: 12308018-12324522 Glycine max
Glyma.18G108100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 12314523-12324522 Glycine max
Glyma.18G108100 10.0kb downstream 10.0kb downstream 16505 true Chr18: 12298018-12314522 Glycine max
Glyma.18G108100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 12298018-12308017 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299377 5265 Fabidae View MSA
124060783 5270 Rosid View MSA
123737048 5271 Pentapetalae View MSA
122785600 5272 Eudicot View MSA
122049216 5273 Angiosperm View MSA
121347172 5274 Embryophyte View MSA
123427859 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.94093E-5 0.0 6.39164E-4 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0194806 0.0 0.0795639 Low  
cufflinks 1.7987E-5 0.0 6.11753E-4 Low Low
cufflinks 0.0819202 0.0 0.316491 Low  
cufflinks 0.0394197 0.0 0.156556 Low  
cufflinks 0.505662 0.0 1.76518   High
cufflinks 0.00596677 0.0 0.0266517 Low  
cufflinks 0.0105963 0.0 0.0451601 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.134       High
cufflinks 0.034     Low  
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.007     Low  
cufflinks 0.714       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.016     Low  
cufflinks 0.003     Low Low
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain