Gene : Glyma.18G096600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14155//PTHR14155:SF176 - RING FINGER DOMAIN-CONTAINING Genomic Order:  966
Name:  ? Glyma.18G096600 Secondary Identifier:  ? PAC:30554489
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G096600 0.5kb upstream 0.5kb upstream 2677 true Chr18: 9929082-9931758 Glycine max
Glyma.18G096600 0.5kb upstream 0.5kb upstream 500 false Chr18: 9929082-9929581 Glycine max
Glyma.18G096600 0.5kb downstream 0.5kb downstream 2677 true Chr18: 9929582-9932258 Glycine max
Glyma.18G096600 0.5kb downstream 0.5kb downstream 500 false Chr18: 9931759-9932258 Glycine max
Glyma.18G096600 1.0kb upstream 1.0kb upstream 3177 true Chr18: 9928582-9931758 Glycine max
Glyma.18G096600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 9928582-9929581 Glycine max
Glyma.18G096600 1.0kb downstream 1.0kb downstream 3177 true Chr18: 9929582-9932758 Glycine max
Glyma.18G096600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 9931759-9932758 Glycine max
Glyma.18G096600 2.0kb upstream 2.0kb upstream 4177 true Chr18: 9927582-9931758 Glycine max
Glyma.18G096600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 9927582-9929581 Glycine max
Glyma.18G096600 2.0kb downstream 2.0kb downstream 4177 true Chr18: 9929582-9933758 Glycine max
Glyma.18G096600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 9931759-9933758 Glycine max
Glyma.18G096600 5.0kb upstream 5.0kb upstream 7177 true Chr18: 9924582-9931758 Glycine max
Glyma.18G096600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 9924582-9929581 Glycine max
Glyma.18G096600 5.0kb downstream 5.0kb downstream 7177 true Chr18: 9929582-9936758 Glycine max
Glyma.18G096600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 9931759-9936758 Glycine max
Glyma.18G096600 10.0kb upstream 10.0kb upstream 12177 true Chr18: 9919582-9931758 Glycine max
Glyma.18G096600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 9919582-9929581 Glycine max
Glyma.18G096600 10.0kb downstream 10.0kb downstream 12177 true Chr18: 9929582-9941758 Glycine max
Glyma.18G096600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 9931759-9941758 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791916 5273 Angiosperm View MSA
122254114 5265 Fabidae View MSA
124064654 5270 Rosid View MSA
123747465 5271 Pentapetalae View MSA
122795286 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121063185 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0643343 0.0 0.27416 Low  
cufflinks 0.0307743 0.0 0.139562 Low  
cufflinks 0.401417 0.0 1.56028   High
cufflinks 0.305977 0.0 1.20339   High
cufflinks 0.0828068 0.0 0.346047 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0421439 0.0 0.185633 Low  
cufflinks 0.0311942 0.0 0.141184 Low  
cufflinks 0.0316091 0.0 0.142968 Low  
cufflinks 0.226        
cufflinks 0.027     Low  
cufflinks 0.336       High
cufflinks 0.093     Low  
cufflinks 0.112        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.008     Low  
cufflinks 4.186       High
cufflinks 0.013     Low  
cufflinks 0.051     Low  
cufflinks 0.008     Low  
cufflinks 0.02     Low  
cufflinks 0.009     Low  
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  

0 Strain