Gene : Glyma.18G099000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12854//PTHR12854:SF12 - ATAXIN 2-RELATED Genomic Order:  990
Name:  ? Glyma.18G099000 Secondary Identifier:  ? PAC:30554640
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G099000 0.5kb upstream 0.5kb upstream 20719 true Chr18: 10326925-10347643 Glycine max
Glyma.18G099000 0.5kb upstream 0.5kb upstream 500 false Chr18: 10347144-10347643 Glycine max
Glyma.18G099000 0.5kb downstream 0.5kb downstream 20719 true Chr18: 10326425-10347143 Glycine max
Glyma.18G099000 0.5kb downstream 0.5kb downstream 500 false Chr18: 10326425-10326924 Glycine max
Glyma.18G099000 1.0kb upstream 1.0kb upstream 21219 true Chr18: 10326925-10348143 Glycine max
Glyma.18G099000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 10347144-10348143 Glycine max
Glyma.18G099000 1.0kb downstream 1.0kb downstream 21219 true Chr18: 10325925-10347143 Glycine max
Glyma.18G099000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 10325925-10326924 Glycine max
Glyma.18G099000 2.0kb upstream 2.0kb upstream 22219 true Chr18: 10326925-10349143 Glycine max
Glyma.18G099000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 10347144-10349143 Glycine max
Glyma.18G099000 2.0kb downstream 2.0kb downstream 22219 true Chr18: 10324925-10347143 Glycine max
Glyma.18G099000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 10324925-10326924 Glycine max
Glyma.18G099000 5.0kb upstream 5.0kb upstream 25219 true Chr18: 10326925-10352143 Glycine max
Glyma.18G099000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 10347144-10352143 Glycine max
Glyma.18G099000 5.0kb downstream 5.0kb downstream 25219 true Chr18: 10321925-10347143 Glycine max
Glyma.18G099000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 10321925-10326924 Glycine max
Glyma.18G099000 10.0kb upstream 10.0kb upstream 30219 true Chr18: 10326925-10357143 Glycine max
Glyma.18G099000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 10347144-10357143 Glycine max
Glyma.18G099000 10.0kb downstream 10.0kb downstream 30219 true Chr18: 10316925-10347143 Glycine max
Glyma.18G099000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 10316925-10326924 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299902 5265 Fabidae View MSA
124064647 5270 Rosid View MSA
123736552 5271 Pentapetalae View MSA
122787256 5272 Eudicot View MSA
122047595 5273 Angiosperm View MSA
121310768 5274 Embryophyte View MSA
123348174 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.06097 0.0 20.0084    
cufflinks 4.72118 0.0 16.6005   Low
cufflinks 5.60093 0.0 18.7607    
cufflinks 8.20481 0.0 25.6435   High
cufflinks 7.5439 0.0 24.0221    
cufflinks 6.78393 0.0 22.0441    
cufflinks 6.96624 0.0 22.5219    
cufflinks 7.15527 0.0 22.9083    
cufflinks 6.8966 0.0 22.3858    
cufflinks 0.75       High
cufflinks 0.551        
cufflinks 0.65        
cufflinks 0.75       High
cufflinks 0.947       High
cufflinks 0.556        
cufflinks 0.382       Low
cufflinks 0.632        
cufflinks 0.706        
cufflinks 0.476        
cufflinks 0.362       Low
cufflinks 0.726        
cufflinks 0.383       Low
cufflinks 0.48        
cufflinks 0.547        
cufflinks 0.359       Low
cufflinks 0.548        

0 Strain