Gene : Glyma.18G159000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10026:SF7 - CYCLIN-C Genomic Order:  1590
Name:  ? Glyma.18G159000 Secondary Identifier:  ? PAC:30558146
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G159000 0.5kb upstream 0.5kb upstream 12220 true Chr18: 35959904-35972123 Glycine max
Glyma.18G159000 0.5kb upstream 0.5kb upstream 500 false Chr18: 35971624-35972123 Glycine max
Glyma.18G159000 0.5kb downstream 0.5kb downstream 12220 true Chr18: 35959404-35971623 Glycine max
Glyma.18G159000 0.5kb downstream 0.5kb downstream 500 false Chr18: 35959404-35959903 Glycine max
Glyma.18G159000 1.0kb upstream 1.0kb upstream 12720 true Chr18: 35959904-35972623 Glycine max
Glyma.18G159000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 35971624-35972623 Glycine max
Glyma.18G159000 1.0kb downstream 1.0kb downstream 12720 true Chr18: 35958904-35971623 Glycine max
Glyma.18G159000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 35958904-35959903 Glycine max
Glyma.18G159000 2.0kb upstream 2.0kb upstream 13720 true Chr18: 35959904-35973623 Glycine max
Glyma.18G159000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 35971624-35973623 Glycine max
Glyma.18G159000 2.0kb downstream 2.0kb downstream 13720 true Chr18: 35957904-35971623 Glycine max
Glyma.18G159000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 35957904-35959903 Glycine max
Glyma.18G159000 5.0kb upstream 5.0kb upstream 16720 true Chr18: 35959904-35976623 Glycine max
Glyma.18G159000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 35971624-35976623 Glycine max
Glyma.18G159000 5.0kb downstream 5.0kb downstream 16720 true Chr18: 35954904-35971623 Glycine max
Glyma.18G159000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 35954904-35959903 Glycine max
Glyma.18G159000 10.0kb upstream 10.0kb upstream 21720 true Chr18: 35959904-35981623 Glycine max
Glyma.18G159000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 35971624-35981623 Glycine max
Glyma.18G159000 10.0kb downstream 10.0kb downstream 21720 true Chr18: 35949904-35971623 Glycine max
Glyma.18G159000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 35949904-35959903 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308625 5265 Fabidae View MSA
124062296 5270 Rosid View MSA
123737404 5271 Pentapetalae View MSA
122789356 5272 Eudicot View MSA
122042556 5273 Angiosperm View MSA
123429117 5275 Viridiplantae View MSA
121346319 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.73838 0.0 24.6667    
cufflinks 6.87363 0.0 19.9065   Low
cufflinks 9.3142 0.0 25.9907    
cufflinks 9.62031 0.0 26.8204    
cufflinks 8.88629 0.0 25.0409    
cufflinks 8.77384 0.0 24.7474    
cufflinks 7.63081 0.0 21.9069   Low
cufflinks 10.2982 0.0 28.5526   High
cufflinks 10.7348 0.0 29.665   High
cufflinks 0.861        
cufflinks 1.272       High
cufflinks 0.914        
cufflinks 1.163        
cufflinks 1.006        
cufflinks 1.488       High
cufflinks 0.751       Low
cufflinks 0.654       Low
cufflinks 0.906        
cufflinks 0.789        
cufflinks 0.953        
cufflinks 1.077        
cufflinks 0.887        
cufflinks 0.764       Low
cufflinks 1.163        
cufflinks 0.835        
cufflinks 1.018        

0 Strain