Gene : Glyma.18G159100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10693:SF23 - NUCLEAR TRANSPORT FACTOR 2 AND RNA RECOGNITION MOTIF DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1591
Name:  ? Glyma.18G159100 Secondary Identifier:  ? PAC:30557047
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G159100 0.5kb upstream 0.5kb upstream 5595 true Chr18: 36064988-36070582 Glycine max
Glyma.18G159100 0.5kb upstream 0.5kb upstream 500 false Chr18: 36064988-36065487 Glycine max
Glyma.18G159100 0.5kb downstream 0.5kb downstream 5595 true Chr18: 36065488-36071082 Glycine max
Glyma.18G159100 0.5kb downstream 0.5kb downstream 500 false Chr18: 36070583-36071082 Glycine max
Glyma.18G159100 1.0kb upstream 1.0kb upstream 6095 true Chr18: 36064488-36070582 Glycine max
Glyma.18G159100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 36064488-36065487 Glycine max
Glyma.18G159100 1.0kb downstream 1.0kb downstream 6095 true Chr18: 36065488-36071582 Glycine max
Glyma.18G159100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 36070583-36071582 Glycine max
Glyma.18G159100 2.0kb upstream 2.0kb upstream 7095 true Chr18: 36063488-36070582 Glycine max
Glyma.18G159100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 36063488-36065487 Glycine max
Glyma.18G159100 2.0kb downstream 2.0kb downstream 7095 true Chr18: 36065488-36072582 Glycine max
Glyma.18G159100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 36070583-36072582 Glycine max
Glyma.18G159100 5.0kb upstream 5.0kb upstream 10095 true Chr18: 36060488-36070582 Glycine max
Glyma.18G159100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 36060488-36065487 Glycine max
Glyma.18G159100 5.0kb downstream 5.0kb downstream 10095 true Chr18: 36065488-36075582 Glycine max
Glyma.18G159100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 36070583-36075582 Glycine max
Glyma.18G159100 10.0kb upstream 10.0kb upstream 15095 true Chr18: 36055488-36070582 Glycine max
Glyma.18G159100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 36055488-36065487 Glycine max
Glyma.18G159100 10.0kb downstream 10.0kb downstream 15095 true Chr18: 36065488-36080582 Glycine max
Glyma.18G159100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 36070583-36080582 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300154 5265 Fabidae View MSA
124061290 5270 Rosid View MSA
123751309 5271 Pentapetalae View MSA
122795066 5272 Eudicot View MSA
122049730 5273 Angiosperm View MSA
121351180 5274 Embryophyte View MSA
123426443 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1033 0.0 35.677    
cufflinks 14.7253 0.0 50.5199    
cufflinks 5.81808 0.0 22.1167   Low
cufflinks 17.4128 0.0 61.6912    
cufflinks 16.5692 0.0 65.0931    
cufflinks 7.50278 0.0 23.5119   Low
cufflinks 24.1488 0.0 96.4714 High High
cufflinks 15.8749 0.0 60.7099    
cufflinks 12.9813 0.0 44.9719    
cufflinks 1.864        
cufflinks 0.516       Low
cufflinks 1.495        
cufflinks 2.503       High
cufflinks 3.238       High
cufflinks 0.658       Low
cufflinks 1.216        
cufflinks 1.499        
cufflinks 1.758        
cufflinks 2.895       High
cufflinks 0.772        
cufflinks 0.864        
cufflinks 1.007        
cufflinks 1.69        
cufflinks 0.635       Low
cufflinks 0.953        
cufflinks 0.947        

0 Strain