Gene : Glyma.18G169200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23324:SF56 - CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED Genomic Order:  1692
Name:  ? Glyma.18G169200 Secondary Identifier:  ? PAC:30558247
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G169200 0.5kb upstream 0.5kb upstream 3271 true Chr18: 39498145-39501415 Glycine max
Glyma.18G169200 0.5kb upstream 0.5kb upstream 500 false Chr18: 39500916-39501415 Glycine max
Glyma.18G169200 0.5kb downstream 0.5kb downstream 3271 true Chr18: 39497645-39500915 Glycine max
Glyma.18G169200 0.5kb downstream 0.5kb downstream 500 false Chr18: 39497645-39498144 Glycine max
Glyma.18G169200 1.0kb upstream 1.0kb upstream 3771 true Chr18: 39498145-39501915 Glycine max
Glyma.18G169200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 39500916-39501915 Glycine max
Glyma.18G169200 1.0kb downstream 1.0kb downstream 3771 true Chr18: 39497145-39500915 Glycine max
Glyma.18G169200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 39497145-39498144 Glycine max
Glyma.18G169200 2.0kb upstream 2.0kb upstream 4771 true Chr18: 39498145-39502915 Glycine max
Glyma.18G169200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 39500916-39502915 Glycine max
Glyma.18G169200 2.0kb downstream 2.0kb downstream 4771 true Chr18: 39496145-39500915 Glycine max
Glyma.18G169200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 39496145-39498144 Glycine max
Glyma.18G169200 5.0kb upstream 5.0kb upstream 7771 true Chr18: 39498145-39505915 Glycine max
Glyma.18G169200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 39500916-39505915 Glycine max
Glyma.18G169200 5.0kb downstream 5.0kb downstream 7771 true Chr18: 39493145-39500915 Glycine max
Glyma.18G169200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 39493145-39498144 Glycine max
Glyma.18G169200 10.0kb upstream 10.0kb upstream 12771 true Chr18: 39498145-39510915 Glycine max
Glyma.18G169200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 39500916-39510915 Glycine max
Glyma.18G169200 10.0kb downstream 10.0kb downstream 12771 true Chr18: 39488145-39500915 Glycine max
Glyma.18G169200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 39488145-39498144 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779542 5273 Angiosperm View MSA
122242249 5265 Fabidae Singleton cluster - no MSA
123986973 5270 Rosid Singleton cluster - no MSA
123743237 5271 Pentapetalae View MSA
122770574 5272 Eudicot View MSA
121051196 5274 Embryophyte View MSA
123091297 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.779705 0.0 2.96847    
cufflinks 0.647847 0.0 2.48436    
cufflinks 0.707506 0.0 2.69756    
cufflinks 1.18552 0.0 4.41952    
cufflinks 0.948806 0.0 3.5765    
cufflinks 2.26223 0.0 8.14671   High
cufflinks 0.629322 0.0 2.41713    
cufflinks 1.4002 0.0 5.1811    
cufflinks 0.833563 0.0 3.15961    
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain