Gene : Glyma.18G169600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10799//PTHR10799:SF698 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED Genomic Order:  1696
Name:  ? Glyma.18G169600 Secondary Identifier:  ? PAC:30555514
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G169600 0.5kb upstream 0.5kb upstream 21076 true Chr18: 39633767-39654842 Glycine max
Glyma.18G169600 0.5kb upstream 0.5kb upstream 500 false Chr18: 39633767-39634266 Glycine max
Glyma.18G169600 0.5kb downstream 0.5kb downstream 21076 true Chr18: 39634267-39655342 Glycine max
Glyma.18G169600 0.5kb downstream 0.5kb downstream 500 false Chr18: 39654843-39655342 Glycine max
Glyma.18G169600 1.0kb upstream 1.0kb upstream 21576 true Chr18: 39633267-39654842 Glycine max
Glyma.18G169600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 39633267-39634266 Glycine max
Glyma.18G169600 1.0kb downstream 1.0kb downstream 21576 true Chr18: 39634267-39655842 Glycine max
Glyma.18G169600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 39654843-39655842 Glycine max
Glyma.18G169600 2.0kb upstream 2.0kb upstream 22576 true Chr18: 39632267-39654842 Glycine max
Glyma.18G169600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 39632267-39634266 Glycine max
Glyma.18G169600 2.0kb downstream 2.0kb downstream 22576 true Chr18: 39634267-39656842 Glycine max
Glyma.18G169600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 39654843-39656842 Glycine max
Glyma.18G169600 5.0kb upstream 5.0kb upstream 25576 true Chr18: 39629267-39654842 Glycine max
Glyma.18G169600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 39629267-39634266 Glycine max
Glyma.18G169600 5.0kb downstream 5.0kb downstream 25576 true Chr18: 39634267-39659842 Glycine max
Glyma.18G169600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 39654843-39659842 Glycine max
Glyma.18G169600 10.0kb upstream 10.0kb upstream 30576 true Chr18: 39624267-39654842 Glycine max
Glyma.18G169600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 39624267-39634266 Glycine max
Glyma.18G169600 10.0kb downstream 10.0kb downstream 30576 true Chr18: 39634267-39664842 Glycine max
Glyma.18G169600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 39654843-39664842 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026618 5273 Angiosperm View MSA
122304646 5265 Fabidae View MSA
124065375 5270 Rosid View MSA
123747187 5271 Pentapetalae View MSA
122790162 5272 Eudicot View MSA
121351372 5274 Embryophyte View MSA
123428399 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.28238 0.0 22.0217    
cufflinks 5.37981 0.0 22.3953    
cufflinks 6.83417 0.0 29.3519   High
cufflinks 4.62072 0.0 20.5063    
cufflinks 2.99979 0.0 12.4859   Low
cufflinks 2.68123 0.0 10.3311   Low
cufflinks 4.75357 0.0 18.1055    
cufflinks 3.4501 0.0 11.779    
cufflinks 3.61402 0.0 13.6939    
cufflinks 0.305        
cufflinks 0.33        
cufflinks 0.494        
cufflinks 0.263       Low
cufflinks 0.263       Low
cufflinks 0.328        
cufflinks 0.625       High
cufflinks 0.267       Low
cufflinks 0.501        
cufflinks 0.653       High
cufflinks 0.653       High
cufflinks 0.296        
cufflinks 0.682       High
cufflinks 0.659       High
cufflinks 0.378        
cufflinks 0.619       High
cufflinks 0.388        

0 Strain