Gene : Glyma.18G150600 G. max Wm82.a2.v1
Defline:  (1 of 11) 4.2.2.23 - Rhamnogalacturonan endolyase / Rhamnogalacturonase B Genomic Order:  1506
Name:  ? Glyma.18G150600 Secondary Identifier:  ? PAC:30558589
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G150600 0.5kb upstream 0.5kb upstream 9537 true Chr18: 27786595-27796131 Glycine max
Glyma.18G150600 0.5kb upstream 0.5kb upstream 500 false Chr18: 27795632-27796131 Glycine max
Glyma.18G150600 0.5kb downstream 0.5kb downstream 9537 true Chr18: 27786095-27795631 Glycine max
Glyma.18G150600 0.5kb downstream 0.5kb downstream 500 false Chr18: 27786095-27786594 Glycine max
Glyma.18G150600 1.0kb upstream 1.0kb upstream 10037 true Chr18: 27786595-27796631 Glycine max
Glyma.18G150600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 27795632-27796631 Glycine max
Glyma.18G150600 1.0kb downstream 1.0kb downstream 10037 true Chr18: 27785595-27795631 Glycine max
Glyma.18G150600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 27785595-27786594 Glycine max
Glyma.18G150600 2.0kb upstream 2.0kb upstream 11037 true Chr18: 27786595-27797631 Glycine max
Glyma.18G150600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 27795632-27797631 Glycine max
Glyma.18G150600 2.0kb downstream 2.0kb downstream 11037 true Chr18: 27784595-27795631 Glycine max
Glyma.18G150600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 27784595-27786594 Glycine max
Glyma.18G150600 5.0kb upstream 5.0kb upstream 14037 true Chr18: 27786595-27800631 Glycine max
Glyma.18G150600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 27795632-27800631 Glycine max
Glyma.18G150600 5.0kb downstream 5.0kb downstream 14037 true Chr18: 27781595-27795631 Glycine max
Glyma.18G150600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 27781595-27786594 Glycine max
Glyma.18G150600 10.0kb upstream 10.0kb upstream 19037 true Chr18: 27786595-27805631 Glycine max
Glyma.18G150600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 27795632-27805631 Glycine max
Glyma.18G150600 10.0kb downstream 10.0kb downstream 19037 true Chr18: 27776595-27795631 Glycine max
Glyma.18G150600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 27776595-27786594 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792559 5273 Angiosperm View MSA
122314545 5265 Fabidae View MSA
124050434 5270 Rosid View MSA
123741525 5271 Pentapetalae View MSA
122798138 5272 Eudicot View MSA
121063781 5274 Embryophyte View MSA
123103506 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.143065 0.0 0.69276 Low Low
cufflinks 1.83924 0.0 6.21169   High
cufflinks 1.35006 0.0 6.48641    
cufflinks 0.580635 0.0 3.45363    
cufflinks 0.558517 0.0 3.26665    
cufflinks 0.517038 0.0 2.30701    
cufflinks 1.06698 0.0 4.18007    
cufflinks 0.423321 0.0 1.96888    
cufflinks 0.815068 0.0 4.46363    
cufflinks 0.092     Low  
cufflinks 0.448       High
cufflinks 0.115     Low  
cufflinks 0.146        
cufflinks 0.118        
cufflinks 0.02     Low Low
cufflinks 0.07     Low  
cufflinks 0.16        
cufflinks 0.118        
cufflinks 0.297       High
cufflinks 0.039     Low Low
cufflinks 0.248        
cufflinks 0.068     Low  
cufflinks 0.062     Low  
cufflinks 0.531       High
cufflinks 0.067     Low  
cufflinks 0.302       High

0 Strain