Gene : Glyma.18G152600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR32411:SF43 - CYSTEINE-RICH REPEAT SECRETORY PROTEIN 55 Genomic Order:  1526
Name:  ? Glyma.18G152600 Secondary Identifier:  ? PAC:30555678
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G152600 0.5kb upstream 0.5kb upstream 1873 true Chr18: 29114907-29116779 Glycine max
Glyma.18G152600 0.5kb upstream 0.5kb upstream 500 false Chr18: 29116280-29116779 Glycine max
Glyma.18G152600 0.5kb downstream 0.5kb downstream 1873 true Chr18: 29114407-29116279 Glycine max
Glyma.18G152600 0.5kb downstream 0.5kb downstream 500 false Chr18: 29114407-29114906 Glycine max
Glyma.18G152600 1.0kb upstream 1.0kb upstream 2373 true Chr18: 29114907-29117279 Glycine max
Glyma.18G152600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 29116280-29117279 Glycine max
Glyma.18G152600 1.0kb downstream 1.0kb downstream 2373 true Chr18: 29113907-29116279 Glycine max
Glyma.18G152600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 29113907-29114906 Glycine max
Glyma.18G152600 2.0kb upstream 2.0kb upstream 3373 true Chr18: 29114907-29118279 Glycine max
Glyma.18G152600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 29116280-29118279 Glycine max
Glyma.18G152600 2.0kb downstream 2.0kb downstream 3373 true Chr18: 29112907-29116279 Glycine max
Glyma.18G152600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 29112907-29114906 Glycine max
Glyma.18G152600 5.0kb upstream 5.0kb upstream 6373 true Chr18: 29114907-29121279 Glycine max
Glyma.18G152600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 29116280-29121279 Glycine max
Glyma.18G152600 5.0kb downstream 5.0kb downstream 6373 true Chr18: 29109907-29116279 Glycine max
Glyma.18G152600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 29109907-29114906 Glycine max
Glyma.18G152600 10.0kb upstream 10.0kb upstream 11373 true Chr18: 29114907-29126279 Glycine max
Glyma.18G152600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 29116280-29126279 Glycine max
Glyma.18G152600 10.0kb downstream 10.0kb downstream 11373 true Chr18: 29104907-29116279 Glycine max
Glyma.18G152600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 29104907-29114906 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314892 5265 Fabidae View MSA
124074309 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.1907 0.0 33.675   High
cufflinks 0.201738 0.0 0.790921 Low Low
cufflinks 1.15517 0.0 4.16227    
cufflinks 0.338006 0.0 1.2969    
cufflinks 0.573356 0.0 2.15164    
cufflinks 14.236 0.0 38.8389   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.64728 0.0 8.88401    
cufflinks 0.68346 0.0 2.54161    
cufflinks 4.914       High
cufflinks 1.812        
cufflinks 0.944        
cufflinks 0.327        
cufflinks 0.487        
cufflinks 0.082       Low
cufflinks 0.782        
cufflinks 0.212       Low
cufflinks 0.166       Low
cufflinks 0.319        
cufflinks 1.438        
cufflinks 1.049        
cufflinks 5.545       High
cufflinks 1.815        
cufflinks 3.32       High
cufflinks 1.359        
cufflinks 0.189       Low

0 Strain