Gene : Glyma.18G154100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31669:SF44 - FAR-RED IMPAIRED RESPONSIVE 1-LIKE PROTEIN Genomic Order:  1541
Name:  ? Glyma.18G154100 Secondary Identifier:  ? PAC:30557927
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G154100 0.5kb upstream 0.5kb upstream 11156 true Chr18: 30666724-30677879 Glycine max
Glyma.18G154100 0.5kb upstream 0.5kb upstream 500 false Chr18: 30666724-30667223 Glycine max
Glyma.18G154100 0.5kb downstream 0.5kb downstream 11156 true Chr18: 30667224-30678379 Glycine max
Glyma.18G154100 0.5kb downstream 0.5kb downstream 500 false Chr18: 30677880-30678379 Glycine max
Glyma.18G154100 1.0kb upstream 1.0kb upstream 11656 true Chr18: 30666224-30677879 Glycine max
Glyma.18G154100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 30666224-30667223 Glycine max
Glyma.18G154100 1.0kb downstream 1.0kb downstream 11656 true Chr18: 30667224-30678879 Glycine max
Glyma.18G154100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 30677880-30678879 Glycine max
Glyma.18G154100 2.0kb upstream 2.0kb upstream 12656 true Chr18: 30665224-30677879 Glycine max
Glyma.18G154100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 30665224-30667223 Glycine max
Glyma.18G154100 2.0kb downstream 2.0kb downstream 12656 true Chr18: 30667224-30679879 Glycine max
Glyma.18G154100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 30677880-30679879 Glycine max
Glyma.18G154100 5.0kb upstream 5.0kb upstream 15656 true Chr18: 30662224-30677879 Glycine max
Glyma.18G154100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 30662224-30667223 Glycine max
Glyma.18G154100 5.0kb downstream 5.0kb downstream 15656 true Chr18: 30667224-30682879 Glycine max
Glyma.18G154100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 30677880-30682879 Glycine max
Glyma.18G154100 10.0kb upstream 10.0kb upstream 20656 true Chr18: 30657224-30677879 Glycine max
Glyma.18G154100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 30657224-30667223 Glycine max
Glyma.18G154100 10.0kb downstream 10.0kb downstream 20656 true Chr18: 30667224-30687879 Glycine max
Glyma.18G154100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 30677880-30687879 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305652 5265 Fabidae View MSA
124072842 5270 Rosid View MSA
123753434 5271 Pentapetalae View MSA
122797932 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.54022 0.0 12.475   High
cufflinks 1.17651 0.0 6.78997    
cufflinks 1.19719 0.0 6.86069    
cufflinks 1.67294 0.0 9.06472    
cufflinks 0.857302 0.0 5.42293   Low
cufflinks 1.60322 0.0 6.94711    
cufflinks 1.44494 0.0 8.15639    
cufflinks 1.96644 0.0 10.5762    
cufflinks 1.68297 0.0 9.10749    
cufflinks 0.069     Low  
cufflinks 0.059       Low
cufflinks 0.119     Low High
cufflinks 0.061     Low  
cufflinks 0.088        
cufflinks 0.087        
cufflinks 0.094     Low  
cufflinks 0.037     Low Low
cufflinks 0.139       High
cufflinks 0.099     Low  
cufflinks 0.119       High
cufflinks 0.066        
cufflinks 0.096        
cufflinks 0.099     Low  
cufflinks 0.069        
cufflinks 0.099        
cufflinks 0.062     Low  

0 Strain