Gene : Glyma.18G154700 G. max Wm82.a2.v1
Defline:  (1 of 40) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  1547
Name:  ? Glyma.18G154700 Secondary Identifier:  ? PAC:30554480
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G154700 0.5kb upstream 0.5kb upstream 5073 true Chr18: 31577882-31582954 Glycine max
Glyma.18G154700 0.5kb upstream 0.5kb upstream 500 false Chr18: 31577882-31578381 Glycine max
Glyma.18G154700 0.5kb downstream 0.5kb downstream 5073 true Chr18: 31578382-31583454 Glycine max
Glyma.18G154700 0.5kb downstream 0.5kb downstream 500 false Chr18: 31582955-31583454 Glycine max
Glyma.18G154700 1.0kb upstream 1.0kb upstream 5573 true Chr18: 31577382-31582954 Glycine max
Glyma.18G154700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 31577382-31578381 Glycine max
Glyma.18G154700 1.0kb downstream 1.0kb downstream 5573 true Chr18: 31578382-31583954 Glycine max
Glyma.18G154700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 31582955-31583954 Glycine max
Glyma.18G154700 2.0kb upstream 2.0kb upstream 6573 true Chr18: 31576382-31582954 Glycine max
Glyma.18G154700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 31576382-31578381 Glycine max
Glyma.18G154700 2.0kb downstream 2.0kb downstream 6573 true Chr18: 31578382-31584954 Glycine max
Glyma.18G154700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 31582955-31584954 Glycine max
Glyma.18G154700 5.0kb upstream 5.0kb upstream 9573 true Chr18: 31573382-31582954 Glycine max
Glyma.18G154700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 31573382-31578381 Glycine max
Glyma.18G154700 5.0kb downstream 5.0kb downstream 9573 true Chr18: 31578382-31587954 Glycine max
Glyma.18G154700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 31582955-31587954 Glycine max
Glyma.18G154700 10.0kb upstream 10.0kb upstream 14573 true Chr18: 31568382-31582954 Glycine max
Glyma.18G154700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 31568382-31578381 Glycine max
Glyma.18G154700 10.0kb downstream 10.0kb downstream 14573 true Chr18: 31578382-31592954 Glycine max
Glyma.18G154700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 31582955-31592954 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301310 5265 Fabidae View MSA
124065834 5270 Rosid View MSA
123743822 5271 Pentapetalae View MSA
122789563 5272 Eudicot View MSA
122044004 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.508265 0.0 3.30952   Low
cufflinks 4.14444 0.0 16.8278    
cufflinks 1.13873 0.0 5.94031    
cufflinks 4.53621 0.0 18.4342    
cufflinks 1.36495 0.0 7.27091    
cufflinks 0.367082 0.0 2.68088   Low
cufflinks 1.33769 0.0 6.68301    
cufflinks 6.2911 0.0 23.7245   High
cufflinks 3.40315 0.0 12.767    
cufflinks 0.824       High
cufflinks 0.035     Low Low
cufflinks 0.35        
cufflinks 0.082     Low  
cufflinks 0.09        
cufflinks 0.161        
cufflinks 0.262        
cufflinks 0.057     Low Low
cufflinks 0.41        
cufflinks 0.752       High
cufflinks 0.207        
cufflinks 0.093        
cufflinks 0.258        
cufflinks 0.218        
cufflinks 0.137        
cufflinks 0.299        
cufflinks 0.094        

0 Strain