Gene : Glyma.18G155400 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.12.98.3 - Methanosarcina-phenazine hydrogenase / Methylviologen-reducing hydrogenase Genomic Order:  1554
Name:  ? Glyma.18G155400 Secondary Identifier:  ? PAC:30558759
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G155400 0.5kb upstream 0.5kb upstream 734 true Chr18: 33800607-33801340 Glycine max
Glyma.18G155400 0.5kb upstream 0.5kb upstream 500 false Chr18: 33800841-33801340 Glycine max
Glyma.18G155400 0.5kb downstream 0.5kb downstream 734 true Chr18: 33800107-33800840 Glycine max
Glyma.18G155400 0.5kb downstream 0.5kb downstream 500 false Chr18: 33800107-33800606 Glycine max
Glyma.18G155400 1.0kb upstream 1.0kb upstream 1234 true Chr18: 33800607-33801840 Glycine max
Glyma.18G155400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 33800841-33801840 Glycine max
Glyma.18G155400 1.0kb downstream 1.0kb downstream 1234 true Chr18: 33799607-33800840 Glycine max
Glyma.18G155400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 33799607-33800606 Glycine max
Glyma.18G155400 2.0kb upstream 2.0kb upstream 2234 true Chr18: 33800607-33802840 Glycine max
Glyma.18G155400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 33800841-33802840 Glycine max
Glyma.18G155400 2.0kb downstream 2.0kb downstream 2234 true Chr18: 33798607-33800840 Glycine max
Glyma.18G155400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 33798607-33800606 Glycine max
Glyma.18G155400 5.0kb upstream 5.0kb upstream 5234 true Chr18: 33800607-33805840 Glycine max
Glyma.18G155400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 33800841-33805840 Glycine max
Glyma.18G155400 5.0kb downstream 5.0kb downstream 5234 true Chr18: 33795607-33800840 Glycine max
Glyma.18G155400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 33795607-33800606 Glycine max
Glyma.18G155400 10.0kb upstream 10.0kb upstream 10234 true Chr18: 33800607-33810840 Glycine max
Glyma.18G155400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 33800841-33810840 Glycine max
Glyma.18G155400 10.0kb downstream 10.0kb downstream 10234 true Chr18: 33790607-33800840 Glycine max
Glyma.18G155400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 33790607-33800606 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028204 5273 Angiosperm View MSA
122247420 5265 Fabidae Singleton cluster - no MSA
123991189 5270 Rosid Singleton cluster - no MSA
123743243 5271 Pentapetalae View MSA
122796055 5272 Eudicot View MSA
121348520 5274 Embryophyte View MSA
123380895 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.152       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.204        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.088       Low
cufflinks 0.398        
cufflinks 0.693        
cufflinks 0.19        
cufflinks 0.258        
cufflinks 0.23        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.691        
cufflinks 2.796       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.569        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain