Gene : Glyma.18G139100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12280//PTHR12280:SF26 - PANTOTHENATE KINASE Genomic Order:  1391
Name:  ? Glyma.18G139100 Secondary Identifier:  ? PAC:30557580
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PANTO-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G139100 0.5kb upstream 0.5kb upstream 8696 true Chr18: 20820169-20828864 Glycine max
Glyma.18G139100 0.5kb upstream 0.5kb upstream 500 false Chr18: 20828365-20828864 Glycine max
Glyma.18G139100 0.5kb downstream 0.5kb downstream 8696 true Chr18: 20819669-20828364 Glycine max
Glyma.18G139100 0.5kb downstream 0.5kb downstream 500 false Chr18: 20819669-20820168 Glycine max
Glyma.18G139100 1.0kb upstream 1.0kb upstream 9196 true Chr18: 20820169-20829364 Glycine max
Glyma.18G139100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 20828365-20829364 Glycine max
Glyma.18G139100 1.0kb downstream 1.0kb downstream 9196 true Chr18: 20819169-20828364 Glycine max
Glyma.18G139100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 20819169-20820168 Glycine max
Glyma.18G139100 2.0kb upstream 2.0kb upstream 10196 true Chr18: 20820169-20830364 Glycine max
Glyma.18G139100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 20828365-20830364 Glycine max
Glyma.18G139100 2.0kb downstream 2.0kb downstream 10196 true Chr18: 20818169-20828364 Glycine max
Glyma.18G139100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 20818169-20820168 Glycine max
Glyma.18G139100 5.0kb upstream 5.0kb upstream 13196 true Chr18: 20820169-20833364 Glycine max
Glyma.18G139100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 20828365-20833364 Glycine max
Glyma.18G139100 5.0kb downstream 5.0kb downstream 13196 true Chr18: 20815169-20828364 Glycine max
Glyma.18G139100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 20815169-20820168 Glycine max
Glyma.18G139100 10.0kb upstream 10.0kb upstream 18196 true Chr18: 20820169-20838364 Glycine max
Glyma.18G139100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 20828365-20838364 Glycine max
Glyma.18G139100 10.0kb downstream 10.0kb downstream 18196 true Chr18: 20810169-20828364 Glycine max
Glyma.18G139100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 20810169-20820168 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308682 5265 Fabidae View MSA
124068622 5270 Rosid View MSA
123738077 5271 Pentapetalae View MSA
122769910 5272 Eudicot View MSA
122042911 5273 Angiosperm View MSA
121349290 5274 Embryophyte View MSA
123381257 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4284 0.0 28.2192    
cufflinks 5.12748 0.0 14.7306    
cufflinks 25.9772 0.0 70.0946 High High
cufflinks 5.85277 0.0 16.5483    
cufflinks 6.52933 0.0 18.3512    
cufflinks 17.6661 0.0 47.131   High
cufflinks 4.37661 0.0 12.9067   Low
cufflinks 6.6321 0.0 18.5492    
cufflinks 6.20779 0.0 17.4777    
cufflinks 1.772        
cufflinks 2.716        
cufflinks 4.915       High
cufflinks 2.404        
cufflinks 2.122        
cufflinks 1.094       Low
cufflinks 1.597        
cufflinks 1.957        
cufflinks 2.915        
cufflinks 2.219        
cufflinks 1.442       Low
cufflinks 2.755        
cufflinks 1.764        
cufflinks 1.941        
cufflinks 2.686        
cufflinks 1.318       Low
cufflinks 2.232        

0 Strain