Gene : Glyma.18G141900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23515:SF3 - HIGH AFFINITY NITRATE TRANSPORTER 2.5 Genomic Order:  1419
Name:  ? Glyma.18G141900 Secondary Identifier:  ? PAC:30558000
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G141900 0.5kb upstream 0.5kb upstream 3624 true Chr18: 22053882-22057505 Glycine max
Glyma.18G141900 0.5kb upstream 0.5kb upstream 500 false Chr18: 22057006-22057505 Glycine max
Glyma.18G141900 0.5kb downstream 0.5kb downstream 3624 true Chr18: 22053382-22057005 Glycine max
Glyma.18G141900 0.5kb downstream 0.5kb downstream 500 false Chr18: 22053382-22053881 Glycine max
Glyma.18G141900 1.0kb upstream 1.0kb upstream 4124 true Chr18: 22053882-22058005 Glycine max
Glyma.18G141900 1.0kb upstream 1.0kb upstream 1000 false Chr18: 22057006-22058005 Glycine max
Glyma.18G141900 1.0kb downstream 1.0kb downstream 4124 true Chr18: 22052882-22057005 Glycine max
Glyma.18G141900 1.0kb downstream 1.0kb downstream 1000 false Chr18: 22052882-22053881 Glycine max
Glyma.18G141900 2.0kb upstream 2.0kb upstream 5124 true Chr18: 22053882-22059005 Glycine max
Glyma.18G141900 2.0kb upstream 2.0kb upstream 2000 false Chr18: 22057006-22059005 Glycine max
Glyma.18G141900 2.0kb downstream 2.0kb downstream 5124 true Chr18: 22051882-22057005 Glycine max
Glyma.18G141900 2.0kb downstream 2.0kb downstream 2000 false Chr18: 22051882-22053881 Glycine max
Glyma.18G141900 5.0kb upstream 5.0kb upstream 8124 true Chr18: 22053882-22062005 Glycine max
Glyma.18G141900 5.0kb upstream 5.0kb upstream 5000 false Chr18: 22057006-22062005 Glycine max
Glyma.18G141900 5.0kb downstream 5.0kb downstream 8124 true Chr18: 22048882-22057005 Glycine max
Glyma.18G141900 5.0kb downstream 5.0kb downstream 5000 false Chr18: 22048882-22053881 Glycine max
Glyma.18G141900 10.0kb upstream 10.0kb upstream 13124 true Chr18: 22053882-22067005 Glycine max
Glyma.18G141900 10.0kb upstream 10.0kb upstream 10000 false Chr18: 22057006-22067005 Glycine max
Glyma.18G141900 10.0kb downstream 10.0kb downstream 13124 true Chr18: 22043882-22057005 Glycine max
Glyma.18G141900 10.0kb downstream 10.0kb downstream 10000 false Chr18: 22043882-22053881 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301071 5265 Fabidae View MSA
124062413 5270 Rosid View MSA
123749951 5271 Pentapetalae View MSA
122791136 5272 Eudicot View MSA
122049482 5273 Angiosperm View MSA
121311428 5274 Embryophyte View MSA
123426832 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.25611 0.0 9.75157    
cufflinks 0.0402707 0.0 0.164295 Low  
cufflinks 0.173173 0.0 0.66588 Low  
cufflinks 0.122121 0.0 0.476723 Low  
cufflinks 18.254 0.0 48.7942   High
cufflinks 59.8043 0.0 177.279 High High
cufflinks 0.0179404 0.0 0.0772676 Low Low
cufflinks 0.070526 0.0 0.280807 Low  
cufflinks 8.87808 0.0 24.0117    
cufflinks 1.447        
cufflinks 1.566        
cufflinks 0.477        
cufflinks 7.937     High High
cufflinks 3.625        
cufflinks 0.689        
cufflinks 0.586        
cufflinks 24.684     High High
cufflinks 0.408        
cufflinks 0.548        
cufflinks 0.073     Low Low
cufflinks 2.595        
cufflinks 0.631        
cufflinks 2.379        
cufflinks 3.609        
cufflinks 0.126       Low
cufflinks 28.175     High High

0 Strain