Gene : Glyma.18G145300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31969:SF4 - GEM-LIKE PROTEIN 1-RELATED Genomic Order:  1453
Name:  ? Glyma.18G145300 Secondary Identifier:  ? PAC:30557724
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G145300 0.5kb upstream 0.5kb upstream 6072 true Chr18: 23653475-23659546 Glycine max
Glyma.18G145300 0.5kb upstream 0.5kb upstream 500 false Chr18: 23653475-23653974 Glycine max
Glyma.18G145300 0.5kb downstream 0.5kb downstream 6072 true Chr18: 23653975-23660046 Glycine max
Glyma.18G145300 0.5kb downstream 0.5kb downstream 500 false Chr18: 23659547-23660046 Glycine max
Glyma.18G145300 1.0kb upstream 1.0kb upstream 6572 true Chr18: 23652975-23659546 Glycine max
Glyma.18G145300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 23652975-23653974 Glycine max
Glyma.18G145300 1.0kb downstream 1.0kb downstream 6572 true Chr18: 23653975-23660546 Glycine max
Glyma.18G145300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 23659547-23660546 Glycine max
Glyma.18G145300 2.0kb upstream 2.0kb upstream 7572 true Chr18: 23651975-23659546 Glycine max
Glyma.18G145300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 23651975-23653974 Glycine max
Glyma.18G145300 2.0kb downstream 2.0kb downstream 7572 true Chr18: 23653975-23661546 Glycine max
Glyma.18G145300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 23659547-23661546 Glycine max
Glyma.18G145300 5.0kb upstream 5.0kb upstream 10572 true Chr18: 23648975-23659546 Glycine max
Glyma.18G145300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 23648975-23653974 Glycine max
Glyma.18G145300 5.0kb downstream 5.0kb downstream 10572 true Chr18: 23653975-23664546 Glycine max
Glyma.18G145300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 23659547-23664546 Glycine max
Glyma.18G145300 10.0kb upstream 10.0kb upstream 15572 true Chr18: 23643975-23659546 Glycine max
Glyma.18G145300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 23643975-23653974 Glycine max
Glyma.18G145300 10.0kb downstream 10.0kb downstream 15572 true Chr18: 23653975-23669546 Glycine max
Glyma.18G145300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 23659547-23669546 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306782 5265 Fabidae View MSA
124073004 5270 Rosid View MSA
123738437 5271 Pentapetalae View MSA
122790242 5272 Eudicot View MSA
122050342 5273 Angiosperm View MSA
121350470 5274 Embryophyte View MSA
123381748 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.22261 0.0 18.1924   High
cufflinks 3.02637 0.0 9.79748   Low
cufflinks 5.16843 0.0 15.5261    
cufflinks 4.26639 0.0 13.1238    
cufflinks 4.59209 0.0 13.9315    
cufflinks 3.47473 0.0 11.0074    
cufflinks 3.36094 0.0 10.6886   Low
cufflinks 4.82911 0.0 14.5874    
cufflinks 4.32688 0.0 13.2761    
cufflinks 0.736       Low
cufflinks 1.535       High
cufflinks 1.011        
cufflinks 0.801        
cufflinks 1.121        
cufflinks 0.762        
cufflinks 0.744       Low
cufflinks 0.922        
cufflinks 1.228        
cufflinks 1.143        
cufflinks 0.755        
cufflinks 1.371       High
cufflinks 0.881        
cufflinks 0.809        
cufflinks 1.802       High
cufflinks 0.746       Low
cufflinks 1.277        

0 Strain