Gene : Glyma.18G146200 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR24078:SF259 - CHAPERONE DNAJ-DOMAIN CONTAINING PROTEIN Genomic Order:  1462
Name:  ? Glyma.18G146200 Secondary Identifier:  ? PAC:30556283
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G146200 0.5kb upstream 0.5kb upstream 1946 true Chr18: 24753304-24755249 Glycine max
Glyma.18G146200 0.5kb upstream 0.5kb upstream 500 false Chr18: 24754750-24755249 Glycine max
Glyma.18G146200 0.5kb downstream 0.5kb downstream 1946 true Chr18: 24752804-24754749 Glycine max
Glyma.18G146200 0.5kb downstream 0.5kb downstream 500 false Chr18: 24752804-24753303 Glycine max
Glyma.18G146200 1.0kb upstream 1.0kb upstream 2446 true Chr18: 24753304-24755749 Glycine max
Glyma.18G146200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 24754750-24755749 Glycine max
Glyma.18G146200 1.0kb downstream 1.0kb downstream 2446 true Chr18: 24752304-24754749 Glycine max
Glyma.18G146200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 24752304-24753303 Glycine max
Glyma.18G146200 2.0kb upstream 2.0kb upstream 3446 true Chr18: 24753304-24756749 Glycine max
Glyma.18G146200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 24754750-24756749 Glycine max
Glyma.18G146200 2.0kb downstream 2.0kb downstream 3446 true Chr18: 24751304-24754749 Glycine max
Glyma.18G146200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 24751304-24753303 Glycine max
Glyma.18G146200 5.0kb upstream 5.0kb upstream 6446 true Chr18: 24753304-24759749 Glycine max
Glyma.18G146200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 24754750-24759749 Glycine max
Glyma.18G146200 5.0kb downstream 5.0kb downstream 6446 true Chr18: 24748304-24754749 Glycine max
Glyma.18G146200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 24748304-24753303 Glycine max
Glyma.18G146200 10.0kb upstream 10.0kb upstream 11446 true Chr18: 24753304-24764749 Glycine max
Glyma.18G146200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 24754750-24764749 Glycine max
Glyma.18G146200 10.0kb downstream 10.0kb downstream 11446 true Chr18: 24743304-24754749 Glycine max
Glyma.18G146200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 24743304-24753303 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315299 5265 Fabidae View MSA
124041668 5270 Rosid View MSA
123751398 5271 Pentapetalae View MSA
122797232 5272 Eudicot View MSA
122050923 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349574 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.35294 0.0 4.76791    
cufflinks 2.5237 0.0 8.37014    
cufflinks 1.08131 0.0 3.89873    
cufflinks 1.25864 0.0 4.4734    
cufflinks 1.70155 0.0 5.84659    
cufflinks 0.380225 0.0 1.43997   Low
cufflinks 2.91442 0.0 9.40107   High
cufflinks 1.4795 0.0 5.19314    
cufflinks 1.70932 0.0 5.9051    
cufflinks 0.357       Low
cufflinks 0.72        
cufflinks 0.495       Low
cufflinks 0.427       Low
cufflinks 0.964        
cufflinks 1.368        
cufflinks 0.978        
cufflinks 2.533       High
cufflinks 0.755        
cufflinks 1.849       High
cufflinks 0.726        
cufflinks 1.407        
cufflinks 0.884        
cufflinks 1.411        
cufflinks 0.611        
cufflinks 0.739        
cufflinks 1.497        

0 Strain