Gene : Glyma.18G133100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10177:SF206 - CYCLIN-D1-1 Genomic Order:  1331
Name:  ? Glyma.18G133100 Secondary Identifier:  ? PAC:30556508
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G133100 0.5kb upstream 0.5kb upstream 5184 true Chr18: 18869634-18874817 Glycine max
Glyma.18G133100 0.5kb upstream 0.5kb upstream 500 false Chr18: 18869634-18870133 Glycine max
Glyma.18G133100 0.5kb downstream 0.5kb downstream 5184 true Chr18: 18870134-18875317 Glycine max
Glyma.18G133100 0.5kb downstream 0.5kb downstream 500 false Chr18: 18874818-18875317 Glycine max
Glyma.18G133100 1.0kb upstream 1.0kb upstream 5684 true Chr18: 18869134-18874817 Glycine max
Glyma.18G133100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 18869134-18870133 Glycine max
Glyma.18G133100 1.0kb downstream 1.0kb downstream 5684 true Chr18: 18870134-18875817 Glycine max
Glyma.18G133100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 18874818-18875817 Glycine max
Glyma.18G133100 2.0kb upstream 2.0kb upstream 6684 true Chr18: 18868134-18874817 Glycine max
Glyma.18G133100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 18868134-18870133 Glycine max
Glyma.18G133100 2.0kb downstream 2.0kb downstream 6684 true Chr18: 18870134-18876817 Glycine max
Glyma.18G133100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 18874818-18876817 Glycine max
Glyma.18G133100 5.0kb upstream 5.0kb upstream 9684 true Chr18: 18865134-18874817 Glycine max
Glyma.18G133100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 18865134-18870133 Glycine max
Glyma.18G133100 5.0kb downstream 5.0kb downstream 9684 true Chr18: 18870134-18879817 Glycine max
Glyma.18G133100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 18874818-18879817 Glycine max
Glyma.18G133100 10.0kb upstream 10.0kb upstream 14684 true Chr18: 18860134-18874817 Glycine max
Glyma.18G133100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 18860134-18870133 Glycine max
Glyma.18G133100 10.0kb downstream 10.0kb downstream 14684 true Chr18: 18870134-18884817 Glycine max
Glyma.18G133100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 18874818-18884817 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311404 5265 Fabidae View MSA
124071667 5270 Rosid View MSA
123751076 5271 Pentapetalae View MSA
122794898 5272 Eudicot View MSA
122046466 5273 Angiosperm View MSA
121350196 5274 Embryophyte View MSA
123428428 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.40195 0.0 30.0825    
cufflinks 6.41522 0.0 23.9757    
cufflinks 1.72509 0.0 6.04661   Low
cufflinks 3.112 0.0 12.0488    
cufflinks 13.1629 0.0 45.4934    
cufflinks 4.43189 0.0 15.22    
cufflinks 4.28471 0.0 14.7814    
cufflinks 29.6155 0.0 110.371 High High
cufflinks 19.6611 0.0 69.1699 High High
cufflinks 8.42     High High
cufflinks 1.093        
cufflinks 0.728       Low
cufflinks 2.669        
cufflinks 1.013       Low
cufflinks 0.599       Low
cufflinks 3.046        
cufflinks 3.053        
cufflinks 2.015        
cufflinks 1.579        
cufflinks 2.721        
cufflinks 2.003        
cufflinks 3.527        
cufflinks 4.699       High
cufflinks 1.845        
cufflinks 2.816        
cufflinks 2.037        

0 Strain