Gene : Glyma.18G134200 G. max Wm82.a2.v1
Defline:  (1 of 13) PTHR24078:SF279 - DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  1342
Name:  ? Glyma.18G134200 Secondary Identifier:  ? PAC:30557764
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G134200 0.5kb upstream 0.5kb upstream 10092 true Chr18: 19253842-19263933 Glycine max
Glyma.18G134200 0.5kb upstream 0.5kb upstream 500 false Chr18: 19263434-19263933 Glycine max
Glyma.18G134200 0.5kb downstream 0.5kb downstream 10092 true Chr18: 19253342-19263433 Glycine max
Glyma.18G134200 0.5kb downstream 0.5kb downstream 500 false Chr18: 19253342-19253841 Glycine max
Glyma.18G134200 1.0kb upstream 1.0kb upstream 10592 true Chr18: 19253842-19264433 Glycine max
Glyma.18G134200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 19263434-19264433 Glycine max
Glyma.18G134200 1.0kb downstream 1.0kb downstream 10592 true Chr18: 19252842-19263433 Glycine max
Glyma.18G134200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 19252842-19253841 Glycine max
Glyma.18G134200 2.0kb upstream 2.0kb upstream 11592 true Chr18: 19253842-19265433 Glycine max
Glyma.18G134200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 19263434-19265433 Glycine max
Glyma.18G134200 2.0kb downstream 2.0kb downstream 11592 true Chr18: 19251842-19263433 Glycine max
Glyma.18G134200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 19251842-19253841 Glycine max
Glyma.18G134200 5.0kb upstream 5.0kb upstream 14592 true Chr18: 19253842-19268433 Glycine max
Glyma.18G134200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 19263434-19268433 Glycine max
Glyma.18G134200 5.0kb downstream 5.0kb downstream 14592 true Chr18: 19248842-19263433 Glycine max
Glyma.18G134200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 19248842-19253841 Glycine max
Glyma.18G134200 10.0kb upstream 10.0kb upstream 19592 true Chr18: 19253842-19273433 Glycine max
Glyma.18G134200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 19263434-19273433 Glycine max
Glyma.18G134200 10.0kb downstream 10.0kb downstream 19592 true Chr18: 19243842-19263433 Glycine max
Glyma.18G134200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 19243842-19253841 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311252 5265 Fabidae View MSA
124061901 5270 Rosid View MSA
123750752 5271 Pentapetalae View MSA
122788591 5272 Eudicot View MSA
122045009 5273 Angiosperm View MSA
121349410 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.7298 0.0 76.1305   High
cufflinks 2.75229 0.0 13.5119    
cufflinks 5.19528 0.0 29.182    
cufflinks 3.03565 0.0 20.6142    
cufflinks 3.67293 0.0 19.3432    
cufflinks 3.47128 0.0 17.3227    
cufflinks 2.44011 0.0 17.3913    
cufflinks 4.93224 0.0 30.1918    
cufflinks 4.09485 0.0 26.0304    
cufflinks 0.146        
cufflinks 0.312        
cufflinks 0.13        
cufflinks 0.074     Low Low
cufflinks 0.076       Low
cufflinks 0.711       High
cufflinks 0.349       High
cufflinks 0.063     Low Low
cufflinks 0.106     Low  
cufflinks 0.074     Low Low
cufflinks 0.322        
cufflinks 0.279        
cufflinks 0.317        
cufflinks 0.154        
cufflinks 0.178        
cufflinks 0.217        
cufflinks 0.091        

0 Strain