Gene : Glyma.18G196200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10367//PTHR10367:SF11 - MRNA-CAPPING ENZYME Genomic Order:  1962
Name:  ? Glyma.18G196200 Secondary Identifier:  ? PAC:30557115
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G196200 0.5kb upstream 0.5kb upstream 27462 true Chr18: 47102246-47129707 Glycine max
Glyma.18G196200 0.5kb upstream 0.5kb upstream 500 false Chr18: 47102246-47102745 Glycine max
Glyma.18G196200 0.5kb downstream 0.5kb downstream 27462 true Chr18: 47102746-47130207 Glycine max
Glyma.18G196200 0.5kb downstream 0.5kb downstream 500 false Chr18: 47129708-47130207 Glycine max
Glyma.18G196200 1.0kb upstream 1.0kb upstream 27962 true Chr18: 47101746-47129707 Glycine max
Glyma.18G196200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 47101746-47102745 Glycine max
Glyma.18G196200 1.0kb downstream 1.0kb downstream 27962 true Chr18: 47102746-47130707 Glycine max
Glyma.18G196200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 47129708-47130707 Glycine max
Glyma.18G196200 2.0kb upstream 2.0kb upstream 28962 true Chr18: 47100746-47129707 Glycine max
Glyma.18G196200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 47100746-47102745 Glycine max
Glyma.18G196200 2.0kb downstream 2.0kb downstream 28962 true Chr18: 47102746-47131707 Glycine max
Glyma.18G196200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 47129708-47131707 Glycine max
Glyma.18G196200 5.0kb upstream 5.0kb upstream 31962 true Chr18: 47097746-47129707 Glycine max
Glyma.18G196200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 47097746-47102745 Glycine max
Glyma.18G196200 5.0kb downstream 5.0kb downstream 31962 true Chr18: 47102746-47134707 Glycine max
Glyma.18G196200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 47129708-47134707 Glycine max
Glyma.18G196200 10.0kb upstream 10.0kb upstream 36962 true Chr18: 47092746-47129707 Glycine max
Glyma.18G196200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 47092746-47102745 Glycine max
Glyma.18G196200 10.0kb downstream 10.0kb downstream 36962 true Chr18: 47102746-47139707 Glycine max
Glyma.18G196200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 47129708-47139707 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298204 5265 Fabidae View MSA
124036361 5270 Rosid View MSA
123609720 5271 Pentapetalae View MSA
122644362 5272 Eudicot View MSA
122046582 5273 Angiosperm View MSA
121350766 5274 Embryophyte View MSA
123427499 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.07431 0.0 31.5397    
cufflinks 11.5651 0.0 39.7919    
cufflinks 12.2057 0.0 47.6126   High
cufflinks 8.54412 0.0 29.8074    
cufflinks 3.76502 0.0 14.9494   Low
cufflinks 3.82594 0.0 15.0043   Low
cufflinks 12.2234 0.0 42.3021   High
cufflinks 6.18914 0.0 22.0952    
cufflinks 5.37022 0.0 16.9894    
cufflinks 0.125        
cufflinks 0.088       Low
cufflinks 0.373        
cufflinks 0.096       Low
cufflinks 0.067     Low Low
cufflinks 0.159        
cufflinks 0.386        
cufflinks 0.162        
cufflinks 0.328        
cufflinks 0.515       High
cufflinks 0.424       High
cufflinks 0.12        
cufflinks 0.485       High
cufflinks 0.382        
cufflinks 0.114        
cufflinks 0.39        
cufflinks 0.204        

0 Strain