Gene : Glyma.18G197600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12526//PTHR12526:SF340 - GLYCOSYLTRANSFERASE Genomic Order:  1976
Name:  ? Glyma.18G197600 Secondary Identifier:  ? PAC:30556764
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G197600 0.5kb upstream 0.5kb upstream 5594 true Chr18: 47409831-47415424 Glycine max
Glyma.18G197600 0.5kb upstream 0.5kb upstream 500 false Chr18: 47414925-47415424 Glycine max
Glyma.18G197600 0.5kb downstream 0.5kb downstream 5594 true Chr18: 47409331-47414924 Glycine max
Glyma.18G197600 0.5kb downstream 0.5kb downstream 500 false Chr18: 47409331-47409830 Glycine max
Glyma.18G197600 1.0kb upstream 1.0kb upstream 6094 true Chr18: 47409831-47415924 Glycine max
Glyma.18G197600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 47414925-47415924 Glycine max
Glyma.18G197600 1.0kb downstream 1.0kb downstream 6094 true Chr18: 47408831-47414924 Glycine max
Glyma.18G197600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 47408831-47409830 Glycine max
Glyma.18G197600 2.0kb upstream 2.0kb upstream 7094 true Chr18: 47409831-47416924 Glycine max
Glyma.18G197600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 47414925-47416924 Glycine max
Glyma.18G197600 2.0kb downstream 2.0kb downstream 7094 true Chr18: 47407831-47414924 Glycine max
Glyma.18G197600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 47407831-47409830 Glycine max
Glyma.18G197600 5.0kb upstream 5.0kb upstream 10094 true Chr18: 47409831-47419924 Glycine max
Glyma.18G197600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 47414925-47419924 Glycine max
Glyma.18G197600 5.0kb downstream 5.0kb downstream 10094 true Chr18: 47404831-47414924 Glycine max
Glyma.18G197600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 47404831-47409830 Glycine max
Glyma.18G197600 10.0kb upstream 10.0kb upstream 15094 true Chr18: 47409831-47424924 Glycine max
Glyma.18G197600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 47414925-47424924 Glycine max
Glyma.18G197600 10.0kb downstream 10.0kb downstream 15094 true Chr18: 47399831-47414924 Glycine max
Glyma.18G197600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 47399831-47409830 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311319 5265 Fabidae View MSA
124066463 5270 Rosid View MSA
123749252 5271 Pentapetalae View MSA
122792766 5272 Eudicot View MSA
122049037 5273 Angiosperm View MSA
123429006 5275 Viridiplantae View MSA
121344163 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.726 0.0 35.0779   High
cufflinks 9.67535 0.0 35.8421   High
cufflinks 6.57296 0.0 25.2818    
cufflinks 5.77728 0.0 19.6917    
cufflinks 3.03312 0.0 13.043    
cufflinks 2.90522 0.0 12.3546    
cufflinks 2.36414 0.0 8.04855   Low
cufflinks 6.29069 0.0 24.7447    
cufflinks 3.20774 0.0 13.5609    
cufflinks 1.173        
cufflinks 0.134       Low
cufflinks 1.704        
cufflinks 0.399        
cufflinks 0.294        
cufflinks 0.09       Low
cufflinks 2.715       High
cufflinks 0.269        
cufflinks 1.149        
cufflinks 1.568        
cufflinks 3.507       High
cufflinks 0.112       Low
cufflinks 3.054       High
cufflinks 2.718       High
cufflinks 0.138       Low
cufflinks 2.916       High
cufflinks 0.199        

0 Strain