Gene : Glyma.18G200000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12383:SF3 - MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 Genomic Order:  2000
Name:  ? Glyma.18G200000 Secondary Identifier:  ? PAC:30557700
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G200000 0.5kb upstream 0.5kb upstream 4285 true Chr18: 47915722-47920006 Glycine max
Glyma.18G200000 0.5kb upstream 0.5kb upstream 500 false Chr18: 47919507-47920006 Glycine max
Glyma.18G200000 0.5kb downstream 0.5kb downstream 4285 true Chr18: 47915222-47919506 Glycine max
Glyma.18G200000 0.5kb downstream 0.5kb downstream 500 false Chr18: 47915222-47915721 Glycine max
Glyma.18G200000 1.0kb upstream 1.0kb upstream 4785 true Chr18: 47915722-47920506 Glycine max
Glyma.18G200000 1.0kb upstream 1.0kb upstream 1000 false Chr18: 47919507-47920506 Glycine max
Glyma.18G200000 1.0kb downstream 1.0kb downstream 4785 true Chr18: 47914722-47919506 Glycine max
Glyma.18G200000 1.0kb downstream 1.0kb downstream 1000 false Chr18: 47914722-47915721 Glycine max
Glyma.18G200000 2.0kb upstream 2.0kb upstream 5785 true Chr18: 47915722-47921506 Glycine max
Glyma.18G200000 2.0kb upstream 2.0kb upstream 2000 false Chr18: 47919507-47921506 Glycine max
Glyma.18G200000 2.0kb downstream 2.0kb downstream 5785 true Chr18: 47913722-47919506 Glycine max
Glyma.18G200000 2.0kb downstream 2.0kb downstream 2000 false Chr18: 47913722-47915721 Glycine max
Glyma.18G200000 5.0kb upstream 5.0kb upstream 8785 true Chr18: 47915722-47924506 Glycine max
Glyma.18G200000 5.0kb upstream 5.0kb upstream 5000 false Chr18: 47919507-47924506 Glycine max
Glyma.18G200000 5.0kb downstream 5.0kb downstream 8785 true Chr18: 47910722-47919506 Glycine max
Glyma.18G200000 5.0kb downstream 5.0kb downstream 5000 false Chr18: 47910722-47915721 Glycine max
Glyma.18G200000 10.0kb upstream 10.0kb upstream 13785 true Chr18: 47915722-47929506 Glycine max
Glyma.18G200000 10.0kb upstream 10.0kb upstream 10000 false Chr18: 47919507-47929506 Glycine max
Glyma.18G200000 10.0kb downstream 10.0kb downstream 13785 true Chr18: 47905722-47919506 Glycine max
Glyma.18G200000 10.0kb downstream 10.0kb downstream 10000 false Chr18: 47905722-47915721 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303311 5265 Fabidae View MSA
124066686 5270 Rosid View MSA
123738438 5271 Pentapetalae View MSA
122786938 5272 Eudicot View MSA
122042561 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121346619 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.94913 0.0 18.15    
cufflinks 5.29094 0.0 16.5008    
cufflinks 4.12733 0.0 19.9678   Low
cufflinks 3.73904 0.0 13.0164   Low
cufflinks 5.97568 0.0 18.119    
cufflinks 6.76014 0.0 33.2589   High
cufflinks 4.93725 0.0 16.0756    
cufflinks 4.68921 0.0 24.8243    
cufflinks 5.68252 0.0 26.782    
cufflinks 0.992        
cufflinks 0.511       Low
cufflinks 1.103        
cufflinks 1.892       High
cufflinks 2.295       High
cufflinks 0.505       Low
cufflinks 1.07        
cufflinks 0.498       Low
cufflinks 0.98        
cufflinks 1.221        
cufflinks 1.02        
cufflinks 0.607        
cufflinks 0.855        
cufflinks 0.952        
cufflinks 0.809        
cufflinks 0.951        
cufflinks 0.561       Low

0 Strain