Gene : Glyma.18G189300 G. max Wm82.a2.v1

Defline:  (1 of 32) KOG0752 - Mitochondrial solute carrier protein Genomic Order:  1893
Name:  ? Glyma.18G189300 Secondary Identifier:  ? PAC:30555557

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G189300 0.5kb upstream 0.5kb upstream 4419 true Chr18: 45693734-45698152 Glycine max
Glyma.18G189300 0.5kb upstream 0.5kb upstream 500 false Chr18: 45697653-45698152 Glycine max
Glyma.18G189300 0.5kb downstream 0.5kb downstream 4419 true Chr18: 45693234-45697652 Glycine max
Glyma.18G189300 0.5kb downstream 0.5kb downstream 500 false Chr18: 45693234-45693733 Glycine max
Glyma.18G189300 1.0kb upstream 1.0kb upstream 4919 true Chr18: 45693734-45698652 Glycine max
Glyma.18G189300 1.0kb upstream 1.0kb upstream 1000 false Chr18: 45697653-45698652 Glycine max
Glyma.18G189300 1.0kb downstream 1.0kb downstream 4919 true Chr18: 45692734-45697652 Glycine max
Glyma.18G189300 1.0kb downstream 1.0kb downstream 1000 false Chr18: 45692734-45693733 Glycine max
Glyma.18G189300 2.0kb upstream 2.0kb upstream 5919 true Chr18: 45693734-45699652 Glycine max
Glyma.18G189300 2.0kb upstream 2.0kb upstream 2000 false Chr18: 45697653-45699652 Glycine max
Glyma.18G189300 2.0kb downstream 2.0kb downstream 5919 true Chr18: 45691734-45697652 Glycine max
Glyma.18G189300 2.0kb downstream 2.0kb downstream 2000 false Chr18: 45691734-45693733 Glycine max
Glyma.18G189300 5.0kb upstream 5.0kb upstream 8919 true Chr18: 45693734-45702652 Glycine max
Glyma.18G189300 5.0kb upstream 5.0kb upstream 5000 false Chr18: 45697653-45702652 Glycine max
Glyma.18G189300 5.0kb downstream 5.0kb downstream 8919 true Chr18: 45688734-45697652 Glycine max
Glyma.18G189300 5.0kb downstream 5.0kb downstream 5000 false Chr18: 45688734-45693733 Glycine max
Glyma.18G189300 10.0kb upstream 10.0kb upstream 13919 true Chr18: 45693734-45707652 Glycine max
Glyma.18G189300 10.0kb upstream 10.0kb upstream 10000 false Chr18: 45697653-45707652 Glycine max
Glyma.18G189300 10.0kb downstream 10.0kb downstream 13919 true Chr18: 45683734-45697652 Glycine max
Glyma.18G189300 10.0kb downstream 10.0kb downstream 10000 false Chr18: 45683734-45693733 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310362 5265 Fabidae View MSA
124069911 5270 Rosid View MSA
123736580 5271 Pentapetalae View MSA
122788448 5272 Eudicot View MSA
122045339 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121344279 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.15687 0.0 27.4797   High
cufflinks 3.5532 0.0 14.3908    
cufflinks 3.26797 0.0 13.5246    
cufflinks 3.63807 0.0 14.9086    
cufflinks 4.33606 0.0 16.5297    
cufflinks 3.65752 0.0 14.793    
cufflinks 5.21492 0.0 18.7486    
cufflinks 2.54343 0.0 11.7681   Low
cufflinks 3.88554 0.0 15.3613    
cufflinks 0.574       Low
cufflinks 0.715        
cufflinks 1.165        
cufflinks 1.076        
cufflinks 1.206        
cufflinks 0.472       Low
cufflinks 0.809        
cufflinks 2.143       High
cufflinks 1.271        
cufflinks 0.966        
cufflinks 0.985        
cufflinks 0.938        
cufflinks 0.986        
cufflinks 1.16        
cufflinks 0.659       Low
cufflinks 0.817        
cufflinks 1.127        

0 Strain