Gene : Glyma.18G189600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11654:SF79 - PROTEIN NRT1/ PTR FAMILY 5.5-RELATED Genomic Order:  1896
Name:  ? Glyma.18G189600 Secondary Identifier:  ? PAC:30556641
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G189600 0.5kb upstream 0.5kb upstream 7328 true Chr18: 45756604-45763931 Glycine max
Glyma.18G189600 0.5kb upstream 0.5kb upstream 500 false Chr18: 45756604-45757103 Glycine max
Glyma.18G189600 0.5kb downstream 0.5kb downstream 7328 true Chr18: 45757104-45764431 Glycine max
Glyma.18G189600 0.5kb downstream 0.5kb downstream 500 false Chr18: 45763932-45764431 Glycine max
Glyma.18G189600 1.0kb upstream 1.0kb upstream 7828 true Chr18: 45756104-45763931 Glycine max
Glyma.18G189600 1.0kb upstream 1.0kb upstream 1000 false Chr18: 45756104-45757103 Glycine max
Glyma.18G189600 1.0kb downstream 1.0kb downstream 7828 true Chr18: 45757104-45764931 Glycine max
Glyma.18G189600 1.0kb downstream 1.0kb downstream 1000 false Chr18: 45763932-45764931 Glycine max
Glyma.18G189600 2.0kb upstream 2.0kb upstream 8828 true Chr18: 45755104-45763931 Glycine max
Glyma.18G189600 2.0kb upstream 2.0kb upstream 2000 false Chr18: 45755104-45757103 Glycine max
Glyma.18G189600 2.0kb downstream 2.0kb downstream 8828 true Chr18: 45757104-45765931 Glycine max
Glyma.18G189600 2.0kb downstream 2.0kb downstream 2000 false Chr18: 45763932-45765931 Glycine max
Glyma.18G189600 5.0kb upstream 5.0kb upstream 11828 true Chr18: 45752104-45763931 Glycine max
Glyma.18G189600 5.0kb upstream 5.0kb upstream 5000 false Chr18: 45752104-45757103 Glycine max
Glyma.18G189600 5.0kb downstream 5.0kb downstream 11828 true Chr18: 45757104-45768931 Glycine max
Glyma.18G189600 5.0kb downstream 5.0kb downstream 5000 false Chr18: 45763932-45768931 Glycine max
Glyma.18G189600 10.0kb upstream 10.0kb upstream 16828 true Chr18: 45747104-45763931 Glycine max
Glyma.18G189600 10.0kb upstream 10.0kb upstream 10000 false Chr18: 45747104-45757103 Glycine max
Glyma.18G189600 10.0kb downstream 10.0kb downstream 16828 true Chr18: 45757104-45773931 Glycine max
Glyma.18G189600 10.0kb downstream 10.0kb downstream 10000 false Chr18: 45763932-45773931 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309877 5265 Fabidae View MSA
124072261 5270 Rosid View MSA
123752034 5271 Pentapetalae View MSA
122791264 5272 Eudicot View MSA
122045337 5273 Angiosperm View MSA
121350655 5274 Embryophyte View MSA
123428779 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.33838 0.0 7.3358    
cufflinks 0.334793 0.0 1.25016    
cufflinks 0.677959 0.0 2.42552    
cufflinks 0.115916 0.0 0.452977 Low Low
cufflinks 0.550853 0.0 2.00568    
cufflinks 0.171583 0.0 0.660361 Low Low
cufflinks 0.288828 0.0 1.08676    
cufflinks 5.97805 0.0 16.6074   High
cufflinks 2.24526 0.0 7.07749    
cufflinks 3.909       High
cufflinks 1.52       High
cufflinks 0.378        
cufflinks 0.804        
cufflinks 0.067     Low  
cufflinks 0.027     Low Low
cufflinks 0.029     Low Low
cufflinks 0.781        
cufflinks 1.357        
cufflinks 0.012     Low Low
cufflinks 0.067     Low  
cufflinks 2.502       High
cufflinks 0.049     Low  
cufflinks 0.061     Low  
cufflinks 1.136        
cufflinks 0.078     Low  
cufflinks 0.656        

0 Strain