Gene : Glyma.18G192800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR21290//PTHR21290:SF29 - SPHINGOMYELIN SYNTHETASE Genomic Order:  1928
Name:  ? Glyma.18G192800 Secondary Identifier:  ? PAC:30556426
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G192800 0.5kb upstream 0.5kb upstream 5765 true Chr18: 46476730-46482494 Glycine max
Glyma.18G192800 0.5kb upstream 0.5kb upstream 500 false Chr18: 46476730-46477229 Glycine max
Glyma.18G192800 0.5kb downstream 0.5kb downstream 5765 true Chr18: 46477230-46482994 Glycine max
Glyma.18G192800 0.5kb downstream 0.5kb downstream 500 false Chr18: 46482495-46482994 Glycine max
Glyma.18G192800 1.0kb upstream 1.0kb upstream 6265 true Chr18: 46476230-46482494 Glycine max
Glyma.18G192800 1.0kb upstream 1.0kb upstream 1000 false Chr18: 46476230-46477229 Glycine max
Glyma.18G192800 1.0kb downstream 1.0kb downstream 6265 true Chr18: 46477230-46483494 Glycine max
Glyma.18G192800 1.0kb downstream 1.0kb downstream 1000 false Chr18: 46482495-46483494 Glycine max
Glyma.18G192800 2.0kb upstream 2.0kb upstream 7265 true Chr18: 46475230-46482494 Glycine max
Glyma.18G192800 2.0kb upstream 2.0kb upstream 2000 false Chr18: 46475230-46477229 Glycine max
Glyma.18G192800 2.0kb downstream 2.0kb downstream 7265 true Chr18: 46477230-46484494 Glycine max
Glyma.18G192800 2.0kb downstream 2.0kb downstream 2000 false Chr18: 46482495-46484494 Glycine max
Glyma.18G192800 5.0kb upstream 5.0kb upstream 10265 true Chr18: 46472230-46482494 Glycine max
Glyma.18G192800 5.0kb upstream 5.0kb upstream 5000 false Chr18: 46472230-46477229 Glycine max
Glyma.18G192800 5.0kb downstream 5.0kb downstream 10265 true Chr18: 46477230-46487494 Glycine max
Glyma.18G192800 5.0kb downstream 5.0kb downstream 5000 false Chr18: 46482495-46487494 Glycine max
Glyma.18G192800 10.0kb upstream 10.0kb upstream 15265 true Chr18: 46467230-46482494 Glycine max
Glyma.18G192800 10.0kb upstream 10.0kb upstream 10000 false Chr18: 46467230-46477229 Glycine max
Glyma.18G192800 10.0kb downstream 10.0kb downstream 15265 true Chr18: 46477230-46492494 Glycine max
Glyma.18G192800 10.0kb downstream 10.0kb downstream 10000 false Chr18: 46482495-46492494 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297756 5265 Fabidae View MSA
124064547 5270 Rosid View MSA
123744784 5271 Pentapetalae View MSA
122788943 5272 Eudicot View MSA
122046269 5273 Angiosperm View MSA
121346433 5274 Embryophyte View MSA
123427335 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.0664 0.0 51.0382    
cufflinks 5.68995 0.0 15.8666    
cufflinks 23.8149 0.0 64.4216 High High
cufflinks 4.07565 0.0 11.7621   Low
cufflinks 11.3209 0.0 30.3096    
cufflinks 35.8668 0.0 99.9822 High High
cufflinks 3.58709 0.0 10.5812   Low
cufflinks 7.15955 0.0 19.5775    
cufflinks 7.08724 0.0 19.4055    
cufflinks 7.993     High  
cufflinks 17.9     High High
cufflinks 4.13       Low
cufflinks 8.941     High  
cufflinks 7.787     High  
cufflinks 4.889        
cufflinks 4.642        
cufflinks 23.942     High High
cufflinks 4.928        
cufflinks 3.677       Low
cufflinks 4.481        
cufflinks 11.483     High  
cufflinks 7.254     High  
cufflinks 5.34        
cufflinks 16.616     High High
cufflinks 5.477        
cufflinks 17.116     High High

0 Strain