Gene : Glyma.18G177200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11709//PTHR11709:SF70 - MULTI-COPPER OXIDASE Genomic Order:  1772
Name:  ? Glyma.18G177200 Secondary Identifier:  ? PAC:30555554
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5466 Glycine max pathologic  
Gmax PWY-6824 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G177200 0.5kb upstream 0.5kb upstream 3321 true Chr18: 42244482-42247802 Glycine max
Glyma.18G177200 0.5kb upstream 0.5kb upstream 500 false Chr18: 42244482-42244981 Glycine max
Glyma.18G177200 0.5kb downstream 0.5kb downstream 3321 true Chr18: 42244982-42248302 Glycine max
Glyma.18G177200 0.5kb downstream 0.5kb downstream 500 false Chr18: 42247803-42248302 Glycine max
Glyma.18G177200 1.0kb upstream 1.0kb upstream 3821 true Chr18: 42243982-42247802 Glycine max
Glyma.18G177200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 42243982-42244981 Glycine max
Glyma.18G177200 1.0kb downstream 1.0kb downstream 3821 true Chr18: 42244982-42248802 Glycine max
Glyma.18G177200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 42247803-42248802 Glycine max
Glyma.18G177200 2.0kb upstream 2.0kb upstream 4821 true Chr18: 42242982-42247802 Glycine max
Glyma.18G177200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 42242982-42244981 Glycine max
Glyma.18G177200 2.0kb downstream 2.0kb downstream 4821 true Chr18: 42244982-42249802 Glycine max
Glyma.18G177200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 42247803-42249802 Glycine max
Glyma.18G177200 5.0kb upstream 5.0kb upstream 7821 true Chr18: 42239982-42247802 Glycine max
Glyma.18G177200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 42239982-42244981 Glycine max
Glyma.18G177200 5.0kb downstream 5.0kb downstream 7821 true Chr18: 42244982-42252802 Glycine max
Glyma.18G177200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 42247803-42252802 Glycine max
Glyma.18G177200 10.0kb upstream 10.0kb upstream 12821 true Chr18: 42234982-42247802 Glycine max
Glyma.18G177200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 42234982-42244981 Glycine max
Glyma.18G177200 10.0kb downstream 10.0kb downstream 12821 true Chr18: 42244982-42257802 Glycine max
Glyma.18G177200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 42247803-42257802 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316188 5265 Fabidae View MSA
124062715 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0709351 0.0 0.284626 Low Low
cufflinks 0.407116 0.0 1.52189    
cufflinks 0.0839685 0.0 0.334639 Low  
cufflinks 1.50807 0.0 5.13586   High
cufflinks 0.3692 0.0 1.3854    
cufflinks 0.159526 0.0 0.621058 Low  
cufflinks 0.068867 0.0 0.276395 Low Low
cufflinks 3.05038 0.0 9.43581   High
cufflinks 0.783282 0.0 2.82074    
cufflinks 1.34       High
cufflinks 0.014     Low Low
cufflinks 0.029     Low Low
cufflinks 0.294        
cufflinks 0.043     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.258        
cufflinks 0.097        
cufflinks 0.112     Low  
cufflinks 0.032     Low Low
cufflinks 0.257        
cufflinks 0.029     Low Low
cufflinks 0.316        
cufflinks 0.14        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.22        
cufflinks 0.099        

0 Strain